Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16p19
(671 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U82010-1|AAC51330.1| 443|Homo sapiens heme A: farnesyltransfera... 105 1e-22
U09466-1|AAA21148.1| 443|Homo sapiens heme A:farnesyltransferas... 105 1e-22
BT006985-1|AAP35631.1| 443|Homo sapiens COX10 homolog, cytochro... 105 1e-22
BC006394-1|AAH06394.1| 443|Homo sapiens COX10 homolog, cytochro... 105 1e-22
BC000060-1|AAH00060.1| 443|Homo sapiens COX10 homolog, cytochro... 105 1e-22
BT006832-1|AAP35478.1| 338|Homo sapiens transitional epithelia ... 31 2.8
BC004468-1|AAH04468.1| 338|Homo sapiens UbiA prenyltransferase ... 31 2.8
AL031291-2|CAI22838.1| 179|Homo sapiens transitional epithelia ... 31 2.8
AL031291-1|CAI22837.1| 338|Homo sapiens transitional epithelia ... 31 2.8
AK222808-1|BAD96528.1| 338|Homo sapiens transitional epithelia ... 31 2.8
AF117064-1|AAD27581.1| 338|Homo sapiens transitional epithelia ... 31 2.8
>U82010-1|AAC51330.1| 443|Homo sapiens heme A: farnesyltransferase
protein.
Length = 443
Score = 105 bits (252), Expect = 1e-22
Identities = 57/110 (51%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Frame = +1
Query: 337 KVTQDTRVWKETPS--YDRKSNTGQYCLMLSKSRLTSLVVLTSMAGYALAPAPFQLTTFA 510
K T++ + WKE YD Q LSK +LT+LVV T+ AG+ALAP PF F
Sbjct: 135 KETKEEKRWKEMKLQVYDLPGILAQ----LSKIKLTALVVSTTAAGFALAPGPFDWPCFL 190
Query: 511 FCAVGTGLVSAAANSINQYHEVPFDAQMSRTKNRVLVKGLLEPVHAIGFA 660
+VGTGL S AANSINQ+ EVPFD+ M+RTKNR LV+G + P+ A+ FA
Sbjct: 191 LTSVGTGLASCAANSINQFFEVPFDSNMNRTKNRPLVRGQISPLLAVSFA 240
>U09466-1|AAA21148.1| 443|Homo sapiens heme A:farnesyltransferase
protein.
Length = 443
Score = 105 bits (252), Expect = 1e-22
Identities = 57/110 (51%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Frame = +1
Query: 337 KVTQDTRVWKETPS--YDRKSNTGQYCLMLSKSRLTSLVVLTSMAGYALAPAPFQLTTFA 510
K T++ + WKE YD Q LSK +LT+LVV T+ AG+ALAP PF F
Sbjct: 135 KETKEEKRWKEMKLQVYDLPGILAQ----LSKIKLTALVVSTTAAGFALAPGPFDWPCFL 190
Query: 511 FCAVGTGLVSAAANSINQYHEVPFDAQMSRTKNRVLVKGLLEPVHAIGFA 660
+VGTGL S AANSINQ+ EVPFD+ M+RTKNR LV+G + P+ A+ FA
Sbjct: 191 LTSVGTGLASCAANSINQFFEVPFDSNMNRTKNRPLVRGQISPLLAVSFA 240
>BT006985-1|AAP35631.1| 443|Homo sapiens COX10 homolog, cytochrome
c oxidase assembly protein, heme A: farnesyltransfera
protein.
Length = 443
Score = 105 bits (252), Expect = 1e-22
Identities = 57/110 (51%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Frame = +1
Query: 337 KVTQDTRVWKETPS--YDRKSNTGQYCLMLSKSRLTSLVVLTSMAGYALAPAPFQLTTFA 510
K T++ + WKE YD Q LSK +LT+LVV T+ AG+ALAP PF F
Sbjct: 135 KETKEEKRWKEMKLQVYDLPGILAQ----LSKIKLTALVVSTTAAGFALAPGPFDWPCFL 190
Query: 511 FCAVGTGLVSAAANSINQYHEVPFDAQMSRTKNRVLVKGLLEPVHAIGFA 660
+VGTGL S AANSINQ+ EVPFD+ M+RTKNR LV+G + P+ A+ FA
Sbjct: 191 LTSVGTGLASCAANSINQFFEVPFDSNMNRTKNRPLVRGQISPLLAVSFA 240
>BC006394-1|AAH06394.1| 443|Homo sapiens COX10 homolog, cytochrome
c oxidase assembly protein, heme A: farnesyltransfera
protein.
Length = 443
Score = 105 bits (252), Expect = 1e-22
Identities = 57/110 (51%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Frame = +1
Query: 337 KVTQDTRVWKETPS--YDRKSNTGQYCLMLSKSRLTSLVVLTSMAGYALAPAPFQLTTFA 510
K T++ + WKE YD Q LSK +LT+LVV T+ AG+ALAP PF F
Sbjct: 135 KETKEEKRWKEMKLQVYDLPGILAQ----LSKIKLTALVVSTTAAGFALAPGPFDWPCFL 190
Query: 511 FCAVGTGLVSAAANSINQYHEVPFDAQMSRTKNRVLVKGLLEPVHAIGFA 660
+VGTGL S AANSINQ+ EVPFD+ M+RTKNR LV+G + P+ A+ FA
Sbjct: 191 LTSVGTGLASCAANSINQFFEVPFDSNMNRTKNRPLVRGQISPLLAVSFA 240
>BC000060-1|AAH00060.1| 443|Homo sapiens COX10 homolog, cytochrome
c oxidase assembly protein, heme A: farnesyltransfera
protein.
Length = 443
Score = 105 bits (252), Expect = 1e-22
Identities = 57/110 (51%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Frame = +1
Query: 337 KVTQDTRVWKETPS--YDRKSNTGQYCLMLSKSRLTSLVVLTSMAGYALAPAPFQLTTFA 510
K T++ + WKE YD Q LSK +LT+LVV T+ AG+ALAP PF F
Sbjct: 135 KETKEEKRWKEMKLQVYDLPGILAQ----LSKIKLTALVVSTTAAGFALAPGPFDWPCFL 190
Query: 511 FCAVGTGLVSAAANSINQYHEVPFDAQMSRTKNRVLVKGLLEPVHAIGFA 660
+VGTGL S AANSINQ+ EVPFD+ M+RTKNR LV+G + P+ A+ FA
Sbjct: 191 LTSVGTGLASCAANSINQFFEVPFDSNMNRTKNRPLVRGQISPLLAVSFA 240
>BT006832-1|AAP35478.1| 338|Homo sapiens transitional epithelia
response protein protein.
Length = 338
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 514 CAVGTGLVSAAANSINQYHEVPFDAQMSRTKNRVLVKGLLEPVHAIGF 657
CAV V A N +N Y++ ++ +R LV +LEP + F
Sbjct: 87 CAVAVLAVHGAGNLVNTYYDFSKGIDHKKSDDRTLVDRILEPQDVVRF 134
>BC004468-1|AAH04468.1| 338|Homo sapiens UbiA prenyltransferase
domain containing 1 protein.
Length = 338
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 514 CAVGTGLVSAAANSINQYHEVPFDAQMSRTKNRVLVKGLLEPVHAIGF 657
CAV V A N +N Y++ ++ +R LV +LEP + F
Sbjct: 87 CAVAVLAVHGAGNLVNTYYDFSKGIDHKKSDDRTLVDRILEPQDVVRF 134
>AL031291-2|CAI22838.1| 179|Homo sapiens transitional epithelia
response protein (TERE1) protein.
Length = 179
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 514 CAVGTGLVSAAANSINQYHEVPFDAQMSRTKNRVLVKGLLEPVHAIGF 657
CAV V A N +N Y++ ++ +R LV +LEP + F
Sbjct: 87 CAVAVLAVHGAGNLVNTYYDFSKGIDHKKSDDRTLVDRILEPQDVVRF 134
>AL031291-1|CAI22837.1| 338|Homo sapiens transitional epithelia
response protein (TERE1) protein.
Length = 338
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 514 CAVGTGLVSAAANSINQYHEVPFDAQMSRTKNRVLVKGLLEPVHAIGF 657
CAV V A N +N Y++ ++ +R LV +LEP + F
Sbjct: 87 CAVAVLAVHGAGNLVNTYYDFSKGIDHKKSDDRTLVDRILEPQDVVRF 134
>AK222808-1|BAD96528.1| 338|Homo sapiens transitional epithelia
response protein variant protein.
Length = 338
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 514 CAVGTGLVSAAANSINQYHEVPFDAQMSRTKNRVLVKGLLEPVHAIGF 657
CAV V A N +N Y++ ++ +R LV +LEP + F
Sbjct: 87 CAVAVLAVHGAGNLVNTYYDFSKGIDHKKSDDRTLVDRILEPQDVVRF 134
>AF117064-1|AAD27581.1| 338|Homo sapiens transitional epithelia
response protein protein.
Length = 338
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 514 CAVGTGLVSAAANSINQYHEVPFDAQMSRTKNRVLVKGLLEPVHAIGF 657
CAV V A N +N Y++ ++ +R LV +LEP + F
Sbjct: 87 CAVAVLAVHGAGNLVNTYYDFSKGIDHKKSDDRTLVDRILEPQDVVRF 134
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,239,581
Number of Sequences: 237096
Number of extensions: 2076765
Number of successful extensions: 7761
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7761
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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