Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16p15
(674 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U86751-1|AAB68608.1| 510|Homo sapiens nucleolar fibrillar cente... 31 3.7
EF560747-1|ABQ59057.1| 538|Homo sapiens TXNDC2 protein protein. 31 3.7
BC050132-1|AAH50132.1| 486|Homo sapiens thioredoxin domain cont... 31 3.7
BC038992-1|AAH38992.1| 510|Homo sapiens CD3e molecule, epsilon ... 31 3.7
AK097656-1|BAC05133.1| 553|Homo sapiens protein ( Homo sapiens ... 31 3.7
AF080095-1|AAK94950.1| 486|Homo sapiens sperm-specific thioredo... 31 3.7
AF017633-1|AAD41158.1| 512|Homo sapiens CD3e-associated protein... 31 3.7
M65085-1|AAA52477.1| 695|Homo sapiens follicle stimulating horm... 30 6.5
BC026189-1|AAH26189.3| 357|Homo sapiens Sad1 and UNC84 domain c... 30 6.5
AF429967-1|AAP97300.1| 354|Homo sapiens hypothetical protein pr... 30 6.5
>U86751-1|AAB68608.1| 510|Homo sapiens nucleolar fibrillar center
protein protein.
Length = 510
Score = 31.1 bits (67), Expect = 3.7
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +2
Query: 398 KQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQ 577
K+ K ++QD T T ++G +DL+ + T K ER H T +P+Q
Sbjct: 385 KKTKKEKQQDATVEPETEVVGPELPDDLEPQAAPTSTKKKKKKKERGHTVT-----EPIQ 439
Query: 578 PVLKKSP 598
P+ + P
Sbjct: 440 PLEPELP 446
>EF560747-1|ABQ59057.1| 538|Homo sapiens TXNDC2 protein protein.
Length = 538
Score = 31.1 bits (67), Expect = 3.7
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
Frame = +2
Query: 362 KVEKTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQ- 538
K E K E Q +G+ + + P +G ++ +K S SP Q
Sbjct: 190 KKEDLPKSSEEAIQPKEGDIPKSSAKPIQPKLGNIAKTSVKPSQPKESDIPKSPEETIQP 249
Query: 539 -HGDTKISKQKPVQPVLKKSP 598
GD S KP+QP L P
Sbjct: 250 KEGDIPKSSAKPIQPKLGNIP 270
>BC050132-1|AAH50132.1| 486|Homo sapiens thioredoxin domain
containing 2 (spermatozoa) protein.
Length = 486
Score = 31.1 bits (67), Expect = 3.7
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
Frame = +2
Query: 362 KVEKTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQ- 538
K E K E Q +G+ + + P +G ++ +K S SP Q
Sbjct: 123 KKEDLPKSSEEAIQPKEGDIPKSSAKPIQPKLGNIAKTSVKPSQPKESDIPKSPEETIQP 182
Query: 539 -HGDTKISKQKPVQPVLKKSP 598
GD S KP+QP L P
Sbjct: 183 KEGDIPKSSAKPIQPKLGNIP 203
>BC038992-1|AAH38992.1| 510|Homo sapiens CD3e molecule, epsilon
associated protein protein.
Length = 510
Score = 31.1 bits (67), Expect = 3.7
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +2
Query: 398 KQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQ 577
K+ K ++QD T T ++G +DL+ + T K ER H T +P+Q
Sbjct: 385 KKTKKEKQQDATVEPETEVVGPELPDDLEPQAAPTSTKKKKKKKERGHTVT-----EPIQ 439
Query: 578 PVLKKSP 598
P+ + P
Sbjct: 440 PLEPELP 446
>AK097656-1|BAC05133.1| 553|Homo sapiens protein ( Homo sapiens
cDNA FLJ40337 fis, clone TESTI2032044, moderately
similar to THIOREDOXIN. ).
Length = 553
Score = 31.1 bits (67), Expect = 3.7
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
Frame = +2
Query: 362 KVEKTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQ- 538
K E K E Q +G+ + + P +G ++ +K S SP Q
Sbjct: 190 KKEDLPKSSEEAIQPKEGDIPKSSAKPIQPKLGNIAKTSVKPSQPKESDIPKSPEETIQP 249
Query: 539 -HGDTKISKQKPVQPVLKKSP 598
GD S KP+QP L P
Sbjct: 250 KEGDIPKSSAKPIQPKLGNIP 270
>AF080095-1|AAK94950.1| 486|Homo sapiens sperm-specific thioredoxin
protein.
Length = 486
Score = 31.1 bits (67), Expect = 3.7
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
Frame = +2
Query: 362 KVEKTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQ- 538
K E K E Q +G+ + + P +G ++ +K S SP Q
Sbjct: 123 KKEDLPKSSEEAIQPKEGDIPKSSAKPIQPKLGNIAKTSVKPSQPKESDIPKSPEETIQP 182
Query: 539 -HGDTKISKQKPVQPVLKKSP 598
GD S KP+QP L P
Sbjct: 183 KEGDIPKSSAKPIQPKLGNIP 203
>AF017633-1|AAD41158.1| 512|Homo sapiens CD3e-associated protein
protein.
Length = 512
Score = 31.1 bits (67), Expect = 3.7
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +2
Query: 398 KQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQ 577
K+ K ++QD T T ++G +DL+ + T K ER H T +P+Q
Sbjct: 387 KKTKKEKQQDATVEPETEVVGPELPDDLEPQAAPTSTKKKKKKKERGHTVT-----EPIQ 441
Query: 578 PVLKKSP 598
P+ + P
Sbjct: 442 PLEPELP 448
>M65085-1|AAA52477.1| 695|Homo sapiens follicle stimulating hormone
receptor protein.
Length = 695
Score = 30.3 bits (65), Expect = 6.5
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +2
Query: 134 KNRMNDFGNLEKIIVRELSCRLCLCTDVVKLKPLSNEVK-RKLKRLFDITVRADDNLPKA 310
K + FG+LEKI + + + DV P +E++ K L IT A NLP
Sbjct: 63 KGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYITPEAFQNLPN- 121
Query: 311 ICHDCLQQVSTLHLYAV-KVEKTQKFL 388
+ + + HL V K+ QK L
Sbjct: 122 LQYLLISNTGIKHLPDVHKIHSLQKVL 148
>BC026189-1|AAH26189.3| 357|Homo sapiens Sad1 and UNC84 domain
containing 1 protein.
Length = 357
Score = 30.3 bits (65), Expect = 6.5
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = -2
Query: 265 PLEFSLYFIAERFEFHYISTKTQTAGQFTYNDF---LQISEIVHSVLELRGITKVKVMLN 95
P EFS+Y I ++ E I GQF YN +Q E+ H+V E K+ + N
Sbjct: 281 PKEFSVYGITKKCEGEEIFL-----GQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSN 335
Query: 94 CT*PNFRCFF 65
P + C +
Sbjct: 336 WGHPKYTCLY 345
>AF429967-1|AAP97300.1| 354|Homo sapiens hypothetical protein
protein.
Length = 354
Score = 30.3 bits (65), Expect = 6.5
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = -2
Query: 265 PLEFSLYFIAERFEFHYISTKTQTAGQFTYNDF---LQISEIVHSVLELRGITKVKVMLN 95
P EFS+Y I ++ E I GQF YN +Q E+ H+V E K+ + N
Sbjct: 278 PKEFSVYGITKKCEGEEIFL-----GQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSN 332
Query: 94 CT*PNFRCFF 65
P + C +
Sbjct: 333 WGHPKYTCLY 342
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,855,587
Number of Sequences: 237096
Number of extensions: 1670053
Number of successful extensions: 4207
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4199
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -