Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16p15
         (674 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   2.0  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   2.7  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              22   6.1  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   8.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   8.1  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   8.1  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -2

Query: 253 SLYFIA-ERFEFHYISTKTQTAGQFTYND 170
           +LY+ A      +Y++TK  T G+F  ND
Sbjct: 261 NLYYSAMSSHNLNYVNTKQFTQGKFQAND 289


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = +2

Query: 335 VSTLHLYAVKVEKTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKN 499
           VST  L    +EK+  +  FH +  KG    G ++ +    G   V+   Q N+N
Sbjct: 268 VSTEVLQDHTLEKSNDYYAFHFEGEKGPNSQGPSSVIDTNTG---VDYFTQINRN 319


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 137 NRMNDFGNLEKIIVRELS 190
           N  +D GN  +++VRE++
Sbjct: 71  NAYDDGGNFNEVVVREIA 88


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 230 PLSNEVKRKLKRLFDITVRADD 295
           PL++E K +++ LF++   A D
Sbjct: 99  PLNSEQKYEVRMLFELLYNAKD 120


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 230 PLSNEVKRKLKRLFDITVRADD 295
           PL++E K +++ LF++   A D
Sbjct: 99  PLNSEQKYEVRMLFELLYNAKD 120


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 324 QSWHIALGRLSSALTV 277
           Q+W  ALG  SSA T+
Sbjct: 352 QAWMTALGTASSAATL 367


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,585
Number of Sequences: 438
Number of extensions: 3502
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)