Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16p13
         (685 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           24   1.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   4.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   4.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   4.7  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 106 VIDGNVGSILFYNRGTRDECWSKD 177
           VID N   ++F+N  TRD  W  D
Sbjct: 440 VIDRN--GVMFFNMVTRDSVWCWD 461


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 468 LKKLFHLPRFSVRDVSSVISKSNRW 394
           L +LFH+P+ S    +  +S   R+
Sbjct: 88  LLRLFHIPQISPASTAKALSDKTRF 112


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 466 KEIKSYLNTGGLGWKEPERNIPWTNFTVSK 555
           K +K   N    GWK P R +  TN  +++
Sbjct: 143 KRVKDSTNCN-CGWKNPSRIVGGTNTGINE 171


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 468 LKKLFHLPRFSVRDVSSVISKSNRW 394
           L +LFH+P+ S    +  +S   R+
Sbjct: 178 LLRLFHIPQISPASTAKALSDKTRF 202


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,210
Number of Sequences: 438
Number of extensions: 4273
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)