Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16p12
         (265 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   1.9  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   1.9  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    21   3.4  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    20   4.5  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              20   4.5  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    20   5.9  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    20   5.9  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    19   7.8  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 1.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 129 LASTYTAVTLKLCNAMDDFYSEFKN 203
           LAST T   +K+   + DF+  F N
Sbjct: 477 LASTTTTNDIKMQKVLIDFWVSFVN 501


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 1.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 129 LASTYTAVTLKLCNAMDDFYSEFKN 203
           LAST T   +K+   + DF+  F N
Sbjct: 477 LASTTTTNDIKMQKVLIDFWVSFVN 501


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
 Frame = +2

Query: 17  YCXXVCSPPDCRPICGPASPLLCQSSVPPTQR--CYPVNPCI 136
           +C  V   P C  IC P    +C+      ++  C P + C+
Sbjct: 53  FCPNVVPKPLCIKICAPG--CVCRLGYLRNKKKVCVPRSKCL 92


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 202 FLNSL*KSSIALH 164
           FLN L KSS+ +H
Sbjct: 425 FLNQLKKSSVLVH 437


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 50  DNPEVNRLVDNXPFLT 3
           D+ +VNRLV+N   +T
Sbjct: 92  DSEQVNRLVNNCKDIT 107


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 19.8 bits (39), Expect = 5.9
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = +2

Query: 17  YCXXVCSPPDCRPICGP 67
           +C  V   P C  IC P
Sbjct: 53  FCPNVVPKPLCIKICAP 69


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 19.8 bits (39), Expect = 5.9
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -1

Query: 232 FYKTSVCF*PFLNSL*KSSIALHNLSVTAVYV 137
           +Y  S+C   F ++L   ++ LH+  V    V
Sbjct: 278 YYGVSICLVTFASALAVVTLNLHHRGVRGTRV 309


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 8/22 (36%), Positives = 9/22 (40%)
 Frame = +2

Query: 17  YCXXVCSPPDCRPICGPASPLL 82
           +C   C P    P     SPLL
Sbjct: 43  FCLPFCGPNVINPFFCDMSPLL 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,296
Number of Sequences: 438
Number of extensions: 1566
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4887441
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)