Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16p01
         (711 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC067773-1|AAH67773.1|  434|Homo sapiens arginine/serine-rich co...    31   5.4  
BC008684-1|AAH08684.2|  434|Homo sapiens arginine/serine-rich co...    31   5.4  
AK023985-1|BAB14755.1|  202|Homo sapiens protein ( Homo sapiens ...    31   5.4  
AB212664-1|BAE93762.1|  434|Homo sapiens hypothetical protein pr...    31   5.4  

>BC067773-1|AAH67773.1|  434|Homo sapiens arginine/serine-rich
           coiled-coil 2 protein.
          Length = 434

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +1

Query: 607 QEAFRQWL--ARKEQEKREKARLEKQKQHTIPA 699
           QEA  + L  A+K QE+REK  +EKQKQ  I A
Sbjct: 236 QEALARRLERAKKLQEQREKEMVEKQKQQEIAA 268


>BC008684-1|AAH08684.2|  434|Homo sapiens arginine/serine-rich
           coiled-coil 2 protein.
          Length = 434

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +1

Query: 607 QEAFRQWL--ARKEQEKREKARLEKQKQHTIPA 699
           QEA  + L  A+K QE+REK  +EKQKQ  I A
Sbjct: 236 QEALARRLERAKKLQEQREKEMVEKQKQQEIAA 268


>AK023985-1|BAB14755.1|  202|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13923 fis, clone Y79AA1000539. ).
          Length = 202

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +1

Query: 607 QEAFRQWL--ARKEQEKREKARLEKQKQHTIPA 699
           QEA  + L  A+K QE+REK  +EKQKQ  I A
Sbjct: 4   QEALARRLERAKKLQEQREKEMVEKQKQQEIAA 36


>AB212664-1|BAE93762.1|  434|Homo sapiens hypothetical protein
           protein.
          Length = 434

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +1

Query: 607 QEAFRQWL--ARKEQEKREKARLEKQKQHTIPA 699
           QEA  + L  A+K QE+REK  +EKQKQ  I A
Sbjct: 236 QEALARRLERAKKLQEQREKEMVEKQKQQEIAA 268


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.316    0.132    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,348,415
Number of Sequences: 237096
Number of extensions: 1875536
Number of successful extensions: 4753
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4739
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)