Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16o18
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 53 2e-07
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defecti... 47 1e-05
U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defecti... 47 1e-05
U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defecti... 47 1e-05
AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity... 47 1e-05
Z66521-14|CAI70416.1| 245|Caenorhabditis elegans Hypothetical p... 44 1e-04
Z66521-13|CAA91403.1| 444|Caenorhabditis elegans Hypothetical p... 44 1e-04
AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U80955-10|AAN65297.2| 475|Caenorhabditis elegans Hypothetical p... 39 0.003
U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical pr... 39 0.003
U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical pr... 39 0.003
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 36 0.035
U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical pr... 31 0.57
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 30 1.3
AC199241-1|ABO33279.1| 343|Caenorhabditis elegans Hypothetical ... 29 2.3
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 28 7.0
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 28 7.0
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 27 9.3
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 27 9.3
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 27 9.3
>Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 56.8 bits (131), Expect = 1e-08
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Frame = +3
Query: 282 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKSQQLRKLFT 461
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 176 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFE 231
Query: 462 DRGPTFPYHWD--VPVACA-MLKAFISELPESILTQELHGQF-----EQATAIA-----E 602
D P+ A ++K ++ +LPE +LT EL+ F E +A A E
Sbjct: 232 RSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNCE 291
Query: 603 PQREATMTNLINKLPNCNHNLLAWL 677
+R + L KLP N+ L ++
Sbjct: 292 EERVEQLRQLARKLPVHNYETLKFI 316
>Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 56.8 bits (131), Expect = 1e-08
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Frame = +3
Query: 282 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKSQQLRKLFT 461
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 405 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFE 460
Query: 462 DRGPTFPYHWD--VPVACA-MLKAFISELPESILTQELHGQF-----EQATAIA-----E 602
D P+ A ++K ++ +LPE +LT EL+ F E +A A E
Sbjct: 461 RSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNCE 520
Query: 603 PQREATMTNLINKLPNCNHNLLAWL 677
+R + L KLP N+ L ++
Sbjct: 521 EERVEQLRQLARKLPVHNYETLKFI 545
>Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 56.8 bits (131), Expect = 1e-08
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Frame = +3
Query: 282 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKSQQLRKLFT 461
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 176 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFE 231
Query: 462 DRGPTFPYHWD--VPVACA-MLKAFISELPESILTQELHGQF-----EQATAIA-----E 602
D P+ A ++K ++ +LPE +LT EL+ F E +A A E
Sbjct: 232 RSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNCE 291
Query: 603 PQREATMTNLINKLPNCNHNLLAWL 677
+R + L KLP N+ L ++
Sbjct: 292 EERVEQLRQLARKLPVHNYETLKFI 316
>Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 56.8 bits (131), Expect = 1e-08
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Frame = +3
Query: 282 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKSQQLRKLFT 461
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 405 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFE 460
Query: 462 DRGPTFPYHWD--VPVACA-MLKAFISELPESILTQELHGQF-----EQATAIA-----E 602
D P+ A ++K ++ +LPE +LT EL+ F E +A A E
Sbjct: 461 RSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNCE 520
Query: 603 PQREATMTNLINKLPNCNHNLLAWL 677
+R + L KLP N+ L ++
Sbjct: 521 EERVEQLRQLARKLPVHNYETLKFI 545
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Frame = +3
Query: 267 GVALPIFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKSQQL 446
G P+ GV + S C D +P++V+ + ++ +G+ + IYR + L
Sbjct: 774 GAPQPVLGVRIADCPTGS-CEDH--VPMIVQACVCVIETYGMDTVGIYRIPGNTAAVNAL 830
Query: 447 RKLFTDRG---------PTFPYHW-DVPVACAMLKAFISELPESILTQELHGQFEQATAI 596
++ ++RG + W DV V ++LK F+ +LPE +LT +L+ F A I
Sbjct: 831 KESLSNRGFDSVDLSKVESLDPRWRDVNVVSSLLKMFLRKLPEPLLTDKLYPFFIDANRI 890
Query: 597 A-EPQREATMTNLINKLPNCNHNLLAWL 677
+ R + NL+ KLP +++ L +L
Sbjct: 891 STHHNRLHKLRNLLRKLPRPHYDTLRFL 918
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical protein
C04D8.1 protein.
Length = 1317
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Frame = +3
Query: 267 GVALPIFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKSQQL 446
G P+ GV + S C D +P++V+ + ++ +G+ + IYR + L
Sbjct: 652 GAPQPVLGVRIADCPTGS-CEDH--VPMIVQACVCVIETYGMDTVGIYRIPGNTAAVNAL 708
Query: 447 RKLFTDRG---------PTFPYHW-DVPVACAMLKAFISELPESILTQELHGQFEQATAI 596
++ ++RG + W DV V ++LK F+ +LPE +LT +L+ F A I
Sbjct: 709 KESLSNRGFDSVDLSKVESLDPRWRDVNVVSSLLKMFLRKLPEPLLTDKLYPFFIDANRI 768
Query: 597 A-EPQREATMTNLINKLPNCNHNLLAWL 677
+ R + NL+ KLP +++ L +L
Sbjct: 769 STHHNRLHKLRNLLRKLPRPHYDTLRFL 796
>Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical
protein T23G11.5 protein.
Length = 512
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/94 (28%), Positives = 49/94 (52%)
Frame = +3
Query: 282 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKSQQLRKLFT 461
+ G+PL +SV D LP R +ID+++ +GL ++ IYR P K + +L +
Sbjct: 52 VLGLPLTESVSADPSLDGIPLPSFFRYAIDFVEENGLCTEGIYRLSPPKSRLDELERR-A 110
Query: 462 DRGPTFPYHWDVPVACAMLKAFISELPESILTQE 563
+ G + D A ++K F+ ++PE ++ E
Sbjct: 111 NCGEKMIFA-DAHDAAGLIKRFLRQIPEPVVPIE 143
>U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defective
protein 1, isoformc protein.
Length = 721
Score = 47.2 bits (107), Expect = 1e-05
Identities = 36/129 (27%), Positives = 67/129 (51%), Gaps = 5/129 (3%)
Frame = +3
Query: 282 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKSQQLR-KLF 458
+FG+ L + V+R R DT P+V+ I ++ G+ +Y K + LR +L
Sbjct: 486 VFGISLSRLVQRER--RDT--PIVLTRLIQEIEKRGVDYSGLYVLCGSVEKKKMLRAELE 541
Query: 459 TDRGPTFPYHWDVP----VACAMLKAFISELPESILTQELHGQFEQATAIAEPQREATMT 626
++ T +P +AC ++K F+ ELPE +++ ++HG +A ++A P T
Sbjct: 542 SNPLGTELAAESIPDTNVIAC-LIKDFLRELPEPLISPQIHGMLLEAASVALPNDVQTNR 600
Query: 627 NLINKLPNC 653
+L+ K+ +C
Sbjct: 601 HLVLKIIDC 609
>U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defective
protein 1, isoformb protein.
Length = 942
Score = 47.2 bits (107), Expect = 1e-05
Identities = 36/129 (27%), Positives = 67/129 (51%), Gaps = 5/129 (3%)
Frame = +3
Query: 282 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKSQQLR-KLF 458
+FG+ L + V+R R DT P+V+ I ++ G+ +Y K + LR +L
Sbjct: 684 VFGISLSRLVQRER--RDT--PIVLTRLIQEIEKRGVDYSGLYVLCGSVEKKKMLRAELE 739
Query: 459 TDRGPTFPYHWDVP----VACAMLKAFISELPESILTQELHGQFEQATAIAEPQREATMT 626
++ T +P +AC ++K F+ ELPE +++ ++HG +A ++A P T
Sbjct: 740 SNPLGTELAAESIPDTNVIAC-LIKDFLRELPEPLISPQIHGMLLEAASVALPNDVQTNR 798
Query: 627 NLINKLPNC 653
+L+ K+ +C
Sbjct: 799 HLVLKIIDC 807
>U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defective
protein 1, isoforma protein.
Length = 987
Score = 47.2 bits (107), Expect = 1e-05
Identities = 36/129 (27%), Positives = 67/129 (51%), Gaps = 5/129 (3%)
Frame = +3
Query: 282 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKSQQLR-KLF 458
+FG+ L + V+R R DT P+V+ I ++ G+ +Y K + LR +L
Sbjct: 752 VFGISLSRLVQRER--RDT--PIVLTRLIQEIEKRGVDYSGLYVLCGSVEKKKMLRAELE 807
Query: 459 TDRGPTFPYHWDVP----VACAMLKAFISELPESILTQELHGQFEQATAIAEPQREATMT 626
++ T +P +AC ++K F+ ELPE +++ ++HG +A ++A P T
Sbjct: 808 SNPLGTELAAESIPDTNVIAC-LIKDFLRELPEPLISPQIHGMLLEAASVALPNDVQTNR 866
Query: 627 NLINKLPNC 653
+L+ K+ +C
Sbjct: 867 HLVLKIIDC 875
>AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity
specification proteinSYD-1 protein.
Length = 942
Score = 47.2 bits (107), Expect = 1e-05
Identities = 36/129 (27%), Positives = 67/129 (51%), Gaps = 5/129 (3%)
Frame = +3
Query: 282 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKSQQLR-KLF 458
+FG+ L + V+R R DT P+V+ I ++ G+ +Y K + LR +L
Sbjct: 684 VFGISLSRLVQRER--RDT--PIVLTRLIQEIEKRGVDYSGLYVLCGSVEKKKMLRAELE 739
Query: 459 TDRGPTFPYHWDVP----VACAMLKAFISELPESILTQELHGQFEQATAIAEPQREATMT 626
++ T +P +AC ++K F+ ELPE +++ ++HG +A ++A P T
Sbjct: 740 SNPLGTELAAESIPDTNVIAC-LIKDFLRELPEPLISPQIHGMLLEAASVALPNDVQTNR 798
Query: 627 NLINKLPNC 653
+L+ K+ +C
Sbjct: 799 HLVLKIIDC 807
>Z66521-14|CAI70416.1| 245|Caenorhabditis elegans Hypothetical
protein W02B12.8b protein.
Length = 245
Score = 44.0 bits (99), Expect = 1e-04
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Frame = +3
Query: 285 FGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPD--KIKSQQLR--- 449
FGVPL+ + H +P +V I+YL+AH L + ++R + IK Q R
Sbjct: 48 FGVPLEFILS----HCGGNIPPIVDQLIEYLEAHALTMEGVFRKSANIGSIKRLQDRINK 103
Query: 450 --KLFTDRGPTFPYHWDVPV--ACAMLKAFISELPESILTQELHGQFEQATAIAEPQREA 617
K+ + P + + V A +LK F L E + T L+ + + +++ ++ A
Sbjct: 104 GEKIDFENDPEYKDNEYVASLHASVLLKTFFRSLGEPLTTNRLYPKLAALSEVSKTEKSA 163
Query: 618 TMTNLINKLPNCNHNLL 668
+ + LP N+ LL
Sbjct: 164 AVKEFVKLLPRENYILL 180
>Z66521-13|CAA91403.1| 444|Caenorhabditis elegans Hypothetical
protein W02B12.8a protein.
Length = 444
Score = 44.0 bits (99), Expect = 1e-04
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Frame = +3
Query: 285 FGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPD--KIKSQQLR--- 449
FGVPL+ + H +P +V I+YL+AH L + ++R + IK Q R
Sbjct: 247 FGVPLEFILS----HCGGNIPPIVDQLIEYLEAHALTMEGVFRKSANIGSIKRLQDRINK 302
Query: 450 --KLFTDRGPTFPYHWDVPV--ACAMLKAFISELPESILTQELHGQFEQATAIAEPQREA 617
K+ + P + + V A +LK F L E + T L+ + + +++ ++ A
Sbjct: 303 GEKIDFENDPEYKDNEYVASLHASVLLKTFFRSLGEPLTTNRLYPKLAALSEVSKTEKSA 362
Query: 618 TMTNLINKLPNCNHNLL 668
+ + LP N+ LL
Sbjct: 363 AVKEFVKLLPRENYILL 379
>AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical
protein Y34B4A.8 protein.
Length = 604
Score = 44.0 bits (99), Expect = 1e-04
Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 6/149 (4%)
Frame = +3
Query: 249 EEIFTLGVALPIFGVPLQQ--SVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEP 422
E + + P+FGVPL + S+++ R V+ D+L+ +G+ + I+R
Sbjct: 227 ERMIATALPRPVFGVPLDEHLSIQKERISG------VLTKCCDFLRQNGMNERGIFRVSG 280
Query: 423 DKIKSQQLRKLFTDRGPTFP----YHWDVPVACAMLKAFISELPESILTQELHGQFEQAT 590
+ K +++R D G Y+ D + LKA++ ELP+ + L + +A
Sbjct: 281 NASKIKRIRAAL-DAGQFDADEKHYNNDPHAVASTLKAYLRELPDPLTMDSLQSDWVEAI 339
Query: 591 AIAEPQREATMTNLINKLPNCNHNLLAWL 677
+ +R + + + K+ + L +L
Sbjct: 340 NLEGEERFSAIDRCLKKMTRGHRQNLIYL 368
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical protein
H08M01.2b protein.
Length = 1341
Score = 41.1 bits (92), Expect = 7e-04
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Frame = +3
Query: 342 LPLVVRDSIDYLQAHG-LKSKDIYRTEPDKIKSQQLRKLFTDRGPTFPYHWDVPV--ACA 512
+P+ + I +++ +G + + +YR ++ ++ K F G +D PV A
Sbjct: 1161 IPIYLEKCIQFIEQNGGFEQEGLYRVPGNQTHLAEVEKRFLKYGEFDVSSFDTPVHVAAT 1220
Query: 513 MLKAFISELPESILTQELHGQFEQATAIAEPQREAT-MTNLINKLPNCNHNLLAWL 677
LK+F S LPES++ H +++Q +++ ++ + + + LP N +L +L
Sbjct: 1221 ALKSFFSCLPESLIPTAYHLRWKQIMMVSDDIKKIDGIRDALAILPVSNQKVLQYL 1276
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical protein
H08M01.2a protein.
Length = 1320
Score = 41.1 bits (92), Expect = 7e-04
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Frame = +3
Query: 342 LPLVVRDSIDYLQAHG-LKSKDIYRTEPDKIKSQQLRKLFTDRGPTFPYHWDVPV--ACA 512
+P+ + I +++ +G + + +YR ++ ++ K F G +D PV A
Sbjct: 1161 IPIYLEKCIQFIEQNGGFEQEGLYRVPGNQTHLAEVEKRFLKYGEFDVSSFDTPVHVAAT 1220
Query: 513 MLKAFISELPESILTQELHGQFEQATAIAEPQREAT-MTNLINKLPNCNHNLLAWL 677
LK+F S LPES++ H +++Q +++ ++ + + + LP N +L +L
Sbjct: 1221 ALKSFFSCLPESLIPTAYHLRWKQIMMVSDDIKKIDGIRDALAILPVSNQKVLQYL 1276
>U80955-10|AAN65297.2| 475|Caenorhabditis elegans Hypothetical
protein T04C9.1c protein.
Length = 475
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Frame = +3
Query: 330 DDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKSQQLRKLFTDRGPTFPY-------- 485
DD G V + ID L+ G+ + +YR K Q++ L DR
Sbjct: 66 DDIGFEFV-QQCIDILEESGIHEQGVYRNCGVTSKVQKMMMLGLDRRKASEKGGLNLRDD 124
Query: 486 HWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAE 602
W+ + +K F+ LPE ++T ELH F A + +
Sbjct: 125 EWETKTISSAVKTFLRNLPEPLMTFELHNVFINAAKMGD 163
>U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical
protein T04C9.1b protein.
Length = 863
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Frame = +3
Query: 330 DDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKSQQLRKLFTDRGPTFPY-------- 485
DD G V + ID L+ G+ + +YR K Q++ L DR
Sbjct: 406 DDIGFEFV-QQCIDILEESGIHEQGVYRNCGVTSKVQKMMMLGLDRRKASEKGGLNLRDD 464
Query: 486 HWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAE 602
W+ + +K F+ LPE ++T ELH F A + +
Sbjct: 465 EWETKTISSAVKTFLRNLPEPLMTFELHNVFINAAKMGD 503
>U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical
protein T04C9.1a protein.
Length = 881
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Frame = +3
Query: 330 DDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKSQQLRKLFTDRGPTFPY-------- 485
DD G V + ID L+ G+ + +YR K Q++ L DR
Sbjct: 406 DDIGFEFV-QQCIDILEESGIHEQGVYRNCGVTSKVQKMMMLGLDRRKASEKGGLNLRDD 464
Query: 486 HWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAE 602
W+ + +K F+ LPE ++T ELH F A + +
Sbjct: 465 EWETKTISSAVKTFLRNLPEPLMTFELHNVFINAAKMGD 503
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 35.5 bits (78), Expect = 0.035
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Frame = +3
Query: 345 PLVVRDSIDYLQAHGLKSKDIYRTEPDKIKSQQLRKLFTDRGPTFPYH-WDVPVACAMLK 521
P + +D+L+ G ++ I+R P + ++L K D+G +H ++ V ++LK
Sbjct: 264 PQPIMTIVDHLRMDGFDAEGIFRKSPKQSTFKEL-KCELDKGVVPDFHKYNTHVLASILK 322
Query: 522 AFISELPESILTQELHGQFE--QATAIAEPQREATMT---NLINKLPNCNHNLLA 671
++ +P IL L G +E EP E ++ L++ LP + LLA
Sbjct: 323 EYLRSIPGKIL---LSGNYELWMREIADEPNTEKKVSCCRALLSHLPTSHSILLA 374
>U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical
protein K09H11.3 protein.
Length = 1085
Score = 31.5 bits (68), Expect = 0.57
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 342 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKSQQLRKLFTDRGP-TFPYHWDVPVACAML 518
+P + ++ + + HG+ + I+R E + ++ + +G P + V C M+
Sbjct: 65 VPKFIVNAFNIISKHGMDTDGIFRKEGNSVRLNRAEVQAIYKGQRDIPNDYSVIDVCTMV 124
Query: 519 KAFISELPESILTQE 563
K F+ +L +L E
Sbjct: 125 KRFLRDLKPPLLDSE 139
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Frame = +3
Query: 342 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKSQQ-LRKLFTDRGPTFPYHWD---VPVAC 509
+P++V I ++ A+G+K + IYR +++ L KL D +P H + V
Sbjct: 585 IPVIVDKCIRFVSAYGMKCEGIYRRNGKVTEAKTILTKLTEDPVGYYPVHENDETVYAVA 644
Query: 510 AMLKAFISELPESILTQELHGQ-FEQATAIAEPQREATMTNLIN 638
+L+ F +L + F+ AT + A LIN
Sbjct: 645 DVLRQFFRKLDAPLFPSSSQADLFDLATESQSDELCARYAQLIN 688
>AC199241-1|ABO33279.1| 343|Caenorhabditis elegans Hypothetical
protein 2RSSE.1 protein.
Length = 343
Score = 29.5 bits (63), Expect = 2.3
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
Frame = +3
Query: 285 FGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKSQQLRKLFTD 464
FGVP+ ++ HD +P + + + G KDI+R ++ + ++L ++
Sbjct: 28 FGVPINEAF----AHD---IPATLLMLLLKVNKDGPAKKDIWRAPGNQAQVRKLSQVMQH 80
Query: 465 RGPTFPYHWDVPVACAMLKAFISELPESILTQELHGQ-FEQA-TAIAEPQREATMTNLIN 638
++ V A +++K F+S+LP I ++ F A T + ++ +
Sbjct: 81 GRLVNIENFTVYTAASVIKKFLSKLPNGIFGRDNEETLFNSASTGMDIEKQRQVFYRIFG 140
Query: 639 KLPNCNHNLLAWL 677
LP + +LL L
Sbjct: 141 SLPVASQHLLVLL 153
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +3
Query: 369 DYLQAHGLKSKDIYRTEPDKIKSQQLRK 452
+YL+A+GL +D+ + +K++ Q+ RK
Sbjct: 426 EYLKAYGLTQEDLEEMKREKLEEQKARK 453
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +3
Query: 369 DYLQAHGLKSKDIYRTEPDKIKSQQLRK 452
+YL+A+GL +D+ + +K++ Q+ RK
Sbjct: 426 EYLKAYGLTQEDLEEMKREKLEEQKARK 453
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical
protein C01F4.2a protein.
Length = 986
Score = 27.5 bits (58), Expect = 9.3
Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Frame = +3
Query: 342 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKSQQLRKLFTDRG------PTFPYHWDVPV 503
+P +V + YL +GL ++R + + +QLR G +
Sbjct: 528 VPKIVENCTQYLMTYGLTQVGLFRVAGNTKRCRQLRNALEKVGGGAVINDNMVENTTSHD 587
Query: 504 ACAMLKAFISELPESILTQELHGQFEQATAIAEPQR 611
+LK + +LP+S+L E + + A + +R
Sbjct: 588 VATLLKEYFRDLPQSLLPGEHYSAYIGAAKLNVDER 623
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
F57F4.4 protein.
Length = 2090
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -2
Query: 343 RPVSSWQRERSTDCCSGTPNIGSATPNVKISSKGTPDVTVDC 218
RP+ S RE + CC+ N PNVK PD C
Sbjct: 1741 RPLWS-DREVTACCCNNADNCNLKDPNVKPGPAVLPDFPTAC 1781
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -2
Query: 343 RPVSSWQRERSTDCCSGTPNIGSATPNVKISSKGTPDVTVDC 218
RP+ S RE + CC+ N PNVK PD C
Sbjct: 1741 RPLWS-DREVTACCCNNADNCNLKDPNVKPGPAVLPDFPTAC 1781
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,533,089
Number of Sequences: 27780
Number of extensions: 241208
Number of successful extensions: 715
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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