Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16o10
         (660 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73896-8|CAA98061.1|  525|Caenorhabditis elegans Hypothetical pr...    38   0.008
Z73422-12|CAJ76980.1|  525|Caenorhabditis elegans Hypothetical p...    38   0.008
Z73422-11|CAA97768.1|  423|Caenorhabditis elegans Hypothetical p...    38   0.008
Z73422-10|CAA97772.1|  525|Caenorhabditis elegans Hypothetical p...    38   0.008
Z81117-14|CAB03313.3|  272|Caenorhabditis elegans Hypothetical p...    32   0.31 
AC024828-2|AAU87812.1|  462|Caenorhabditis elegans Hypothetical ...    30   1.3  
AL021501-2|CAA16415.2|  356|Caenorhabditis elegans Hypothetical ...    29   2.2  
AL031632-2|CAA21005.2|  789|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z81123-4|CAB03367.2|  986|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z54281-8|CAA91051.2|  986|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AL023835-11|CAA19495.1|  335|Caenorhabditis elegans Hypothetical...    28   5.1  
Z35603-3|CAA84675.1|  433|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AF078790-10|AAC26931.1|  197|Caenorhabditis elegans Hypothetical...    28   6.8  
Z82262-5|CAE17771.1|  679|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z78019-1|CAB01456.1|  662|Caenorhabditis elegans Hypothetical pr...    27   8.9  
U56961-6|AAK39299.1|  497|Caenorhabditis elegans Hypothetical pr...    27   8.9  
U28740-2|AAM51506.2|  417|Caenorhabditis elegans Hypothetical pr...    27   8.9  
U28740-1|AAA68317.3|  434|Caenorhabditis elegans Hypothetical pr...    27   8.9  
AF047653-1|AAC04458.2|  272|Caenorhabditis elegans Hypothetical ...    27   8.9  

>Z73896-8|CAA98061.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.9 protein.
          Length = 525

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = -3

Query: 346 LSLFVKGFIFIESM-FGCYEYSYINSLVSTVILSSFKQQS---IINITF*ICSGPITCWM 179
           L L +K    +E +   C EY  +NSL++   L++ KQ S   I+N+   +C     C  
Sbjct: 386 LQLIIKNCSKLEELSLDCCEYLTVNSLITLGNLNNLKQLSLPGIVNVDDSVCLQISRCSK 445

Query: 178 VTFEGIGFCR 149
           +T+  I FCR
Sbjct: 446 LTYLNINFCR 455


>Z73422-12|CAJ76980.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.9 protein.
          Length = 525

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = -3

Query: 346 LSLFVKGFIFIESM-FGCYEYSYINSLVSTVILSSFKQQS---IINITF*ICSGPITCWM 179
           L L +K    +E +   C EY  +NSL++   L++ KQ S   I+N+   +C     C  
Sbjct: 386 LQLIIKNCSKLEELSLDCCEYLTVNSLITLGNLNNLKQLSLPGIVNVDDSVCLQISRCSK 445

Query: 178 VTFEGIGFCR 149
           +T+  I FCR
Sbjct: 446 LTYLNINFCR 455


>Z73422-11|CAA97768.1|  423|Caenorhabditis elegans Hypothetical
           protein B0564.6b protein.
          Length = 423

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = -3

Query: 346 LSLFVKGFIFIESM-FGCYEYSYINSLVSTVILSSFKQQS---IINITF*ICSGPITCWM 179
           L L +K    +E +   C EY  +NSL++   L++ KQ S   I+N+   +C     C  
Sbjct: 284 LQLIIKNCSKLEELSLDCCEYLTVNSLITLGNLNNLKQLSLPGIVNVDDSVCLQISRCSK 343

Query: 178 VTFEGIGFCR 149
           +T+  I FCR
Sbjct: 344 LTYLNINFCR 353


>Z73422-10|CAA97772.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.6a protein.
          Length = 525

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = -3

Query: 346 LSLFVKGFIFIESM-FGCYEYSYINSLVSTVILSSFKQQS---IINITF*ICSGPITCWM 179
           L L +K    +E +   C EY  +NSL++   L++ KQ S   I+N+   +C     C  
Sbjct: 386 LQLIIKNCSKLEELSLDCCEYLTVNSLITLGNLNNLKQLSLPGIVNVDDSVCLQISRCSK 445

Query: 178 VTFEGIGFCR 149
           +T+  I FCR
Sbjct: 446 LTYLNINFCR 455


>Z81117-14|CAB03313.3|  272|Caenorhabditis elegans Hypothetical
           protein T06E6.3 protein.
          Length = 272

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +3

Query: 438 GKFIIFSYIEEKYLHYVINLETIIEIFEKLDFMYDFNIQGTRY 566
           G  ++  Y    Y H++I+L   + +F  + +   FNI+ T+Y
Sbjct: 52  GYILMICYKASTYFHFIISLNRFLSVFTPIFYNQMFNIKFTKY 94


>AC024828-2|AAU87812.1|  462|Caenorhabditis elegans Hypothetical
           protein Y55F3BL.2 protein.
          Length = 462

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +3

Query: 411 KNEEKLENKGKFIIFSYIEEKYLHYVINL--ETIIEIFEKLDFMYDFNIQGTRYKTRNEF 584
           K  +KL+N GK   F     KYL + +N   +   +  E + F Y+ N++ T + T+  F
Sbjct: 7   KTNKKLKNSGKNCFFFQFSAKYLEFSVNFPRKNSKKKLETIIF-YEKNVEKTLFFTKQYF 65


>AL021501-2|CAA16415.2|  356|Caenorhabditis elegans Hypothetical
           protein Y61B8A.2 protein.
          Length = 356

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = -3

Query: 343 SLFVKGFIFIESMFGCYEYSYINSLVSTVI 254
           S+ ++GFI+I  +FG Y  S+I   V+T+I
Sbjct: 206 SILIEGFIWIFPIFGIYSASFILFQVTTLI 235


>AL031632-2|CAA21005.2|  789|Caenorhabditis elegans Hypothetical
           protein Y32B12B.2 protein.
          Length = 789

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 16/68 (23%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
 Frame = +3

Query: 237 CLKDDNITVETKLFIYEYS*QPNMDSIKIKPFTNKDN-YKAWRKLIKLLLDTKGIKIDDK 413
           C+ ++     T++ +YE S +  +D ++ K     D  +K W K  K+++D+   + +++
Sbjct: 625 CIDEEEDYDNTEI-VYE-SEEDELDGLEAKLERESDRRHKKWEKKNKVMIDSDDEEEEEE 682

Query: 414 NEEKLENK 437
           N++  EN+
Sbjct: 683 NDDDKENQ 690


>Z81123-4|CAB03367.2|  986|Caenorhabditis elegans Hypothetical
           protein F46C5.6 protein.
          Length = 986

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
 Frame = +3

Query: 336 NKDNYKAWRKLIKLLLDTKGIKIDDKNEEKLENKGKFII--FSYIEEK--YLHYVINLET 503
           N+D  K ++ ++ LLL+     I ++ E   + K K +I   S I  +  +L     LET
Sbjct: 167 NEDLVKKFQGIVDLLLENILQNIQNQKEHHTQEKEKIVIKAGSSINNQMHHLSAAAWLET 226

Query: 504 IIEIFEKL 527
           I+E+ +KL
Sbjct: 227 IVEVADKL 234


>Z54281-8|CAA91051.2|  986|Caenorhabditis elegans Hypothetical
           protein F46C5.6 protein.
          Length = 986

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
 Frame = +3

Query: 336 NKDNYKAWRKLIKLLLDTKGIKIDDKNEEKLENKGKFII--FSYIEEK--YLHYVINLET 503
           N+D  K ++ ++ LLL+     I ++ E   + K K +I   S I  +  +L     LET
Sbjct: 167 NEDLVKKFQGIVDLLLENILQNIQNQKEHHTQEKEKIVIKAGSSINNQMHHLSAAAWLET 226

Query: 504 IIEIFEKL 527
           I+E+ +KL
Sbjct: 227 IVEVADKL 234


>AL023835-11|CAA19495.1|  335|Caenorhabditis elegans Hypothetical
           protein Y37A1B.12 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +2

Query: 194 GPRTNLKGNIYYTLLFKRRQYNRGNQTVYIRIFIATKHGFNKNK 325
           GP T   G  Y T +  +  +  G Q+ Y++ F+ATK  F  NK
Sbjct: 89  GPGT---GKNYVTEIIAKNTFRSGLQSPYVKYFVATK-DFPNNK 128


>Z35603-3|CAA84675.1|  433|Caenorhabditis elegans Hypothetical
           protein T02C12.3 protein.
          Length = 433

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 188 GYGPRTNLKGNIYYTLLFKRRQY 256
           GY PRT+  G +Y T++   RQ+
Sbjct: 293 GYDPRTDRNGGLYQTIMVSFRQH 315


>AF078790-10|AAC26931.1|  197|Caenorhabditis elegans Hypothetical
           protein F36H12.5 protein.
          Length = 197

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 324 KPFTNKDNYKAWRKLIKLLLDTKGIKIDDKNEEKLENK 437
           K   NK +YK W K+I+     K +  +D  ++K +NK
Sbjct: 125 KKAENKGDYKTWNKIIENSEFDKTLSENDGKKKKKKNK 162


>Z82262-5|CAE17771.1|  679|Caenorhabditis elegans Hypothetical
           protein C43F9.10 protein.
          Length = 679

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
 Frame = +3

Query: 234 CCLKDDNITVETKLFIYEYS*QPNMDSIKIKPFTN--KDNYK---AWRKLIKLLLDTKGI 398
           C     N+T +  +F+   S  PN+ S+  K F N  K  YK   ++ +++ +  + K  
Sbjct: 453 CEFDKSNLTGDLTVFLVGNSLTPNLGSLVFKTFKNHAKVMYKYSNSYCEILTVANEKKCR 512

Query: 399 KIDDKNEEKLENKGKFIIF 455
           K  D  EE++  K   I+F
Sbjct: 513 KAHDTYEEEVFKKLPDILF 531


>Z78019-1|CAB01456.1|  662|Caenorhabditis elegans Hypothetical
           protein ZK863.4 protein.
          Length = 662

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/60 (25%), Positives = 29/60 (48%)
 Frame = +3

Query: 462 IEEKYLHYVINLETIIEIFEKLDFMYDFNIQGTRYKTRNEFFRDAIFGNHIRRYK*ITKY 641
           ++ K   Y+IN + +I   +        N Q  R    NE+  D +FG++ + ++ + KY
Sbjct: 335 VKTKLNSYIIN-QLVIHFVQAATNKVHVNPQAKRDSRVNEYNFDTLFGDYCKFFRELFKY 393


>U56961-6|AAK39299.1|  497|Caenorhabditis elegans Hypothetical
           protein T19D7.1 protein.
          Length = 497

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/57 (26%), Positives = 31/57 (54%)
 Frame = +1

Query: 412 KMRKNWKIRGNL*YLVILKKNIYIM*LIWKQL*KFLKN*ILCMILIYKGQDIKHVMN 582
           K+ KNWKI   +  ++ L +N+YI+  I+ ++ K L   +  ++ +   +  K + N
Sbjct: 166 KLLKNWKIFLKIRKMLSLSRNVYIIATIYVKIYKNLHYKMCKLLFVLVRKICKFIKN 222


>U28740-2|AAM51506.2|  417|Caenorhabditis elegans Hypothetical
           protein B0563.6b protein.
          Length = 417

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = -3

Query: 604 PNIASRKNSLRVLYLVPCILKSYIKSNFSKISIIVSKLIT*CKY 473
           PN A+   ++   Y++PCI    I  N + + ++ S+ +    Y
Sbjct: 7   PNAAATVGNIAYCYVLPCICAIGIVGNITNLMVLASRRLRAVSY 50


>U28740-1|AAA68317.3|  434|Caenorhabditis elegans Hypothetical
           protein B0563.6a protein.
          Length = 434

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = -3

Query: 604 PNIASRKNSLRVLYLVPCILKSYIKSNFSKISIIVSKLIT*CKY 473
           PN A+   ++   Y++PCI    I  N + + ++ S+ +    Y
Sbjct: 16  PNAAATVGNIAYCYVLPCICAIGIVGNITNLMVLASRRLRAVSY 59


>AF047653-1|AAC04458.2|  272|Caenorhabditis elegans Hypothetical
           protein W02F12.2 protein.
          Length = 272

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/53 (28%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
 Frame = -3

Query: 646 TVYXVIYLYLLIWFPNIASRKNSL-RVLYLVPCILKS---YIKSNFSKISIIV 500
           TV+ V+Y+ ++ WFP   S++ +L R + L+   L S   +++ N + I++++
Sbjct: 103 TVFLVVYIPVMKWFPEKFSKRLTLVRWVVLIVTALVSGLCFLEPNLNAIALML 155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,037,141
Number of Sequences: 27780
Number of extensions: 302867
Number of successful extensions: 872
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)