Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16o10
         (660 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   4.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   4.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   4.5  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.0  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   6.0  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = +3

Query: 333 TNKDNYKAWRKLIKLLLDTKG----IKIDDKNEEKLENKGKFII 452
           TN++ Y+  +  +  LLD KG    + +   +EE +++K   +I
Sbjct: 568 TNEETYRGGKGALSCLLDGKGDVAFVPLTALSEEGVQSKDLALI 611


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = +3

Query: 333 TNKDNYKAWRKLIKLLLDTKG----IKIDDKNEEKLENKGKFII 452
           TN++ Y+  +  +  LLD KG    + +   +EE +++K   +I
Sbjct: 568 TNEETYRGGKGALSCLLDGKGDVAFVPLTALSEEGVQSKDLALI 611


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = +3

Query: 333 TNKDNYKAWRKLIKLLLDTKG----IKIDDKNEEKLENKGKFII 452
           TN++ Y+  +  +  LLD KG    + +   +EE +++K   +I
Sbjct: 568 TNEETYRGGKGALSCLLDGKGDVAFVPLTALSEEGVQSKDLALI 611


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/19 (47%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
 Frame = +1

Query: 601 SGTILEDINK-LXNIQFEI 654
           SGT+L+DIN+ +  + F+I
Sbjct: 289 SGTVLKDINRQVDELNFDI 307


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 366 LIKLLLDTKGIKIDDKNEEKLENKGKFII 452
           + K L +   IKI D  EE   N G +II
Sbjct: 220 IFKNLPEETLIKISDVLEETFYNNGDYII 248


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,391
Number of Sequences: 438
Number of extensions: 4098
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)