Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16o08
         (356 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    52   4e-06
UniRef50_A5DE84 Cluster: Putative uncharacterized protein; n=1; ...    35   0.48 
UniRef50_Q8SV02 Cluster: Putative uncharacterized protein ECU07_...    33   1.5  
UniRef50_A4PIG5 Cluster: Ets transcription factor Elf; n=2; Cion...    32   2.5  
UniRef50_UPI0000E1F6E9 Cluster: PREDICTED: hypothetical protein;...    31   4.4  
UniRef50_Q08BD9 Cluster: Zgc:153909; n=4; Danio rerio|Rep: Zgc:1...    31   4.4  
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    31   4.4  
UniRef50_A4RP26 Cluster: Putative uncharacterized protein; n=1; ...    31   4.4  
UniRef50_A6M139 Cluster: von Willebrand factor, type A precursor...    31   5.9  
UniRef50_Q2GPR0 Cluster: Putative uncharacterized protein; n=1; ...    31   5.9  
UniRef50_Q2Y4Q3 Cluster: Putative uncharacterized protein C4_003...    31   7.7  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 51.6 bits (118), Expect = 4e-06
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = -3

Query: 351 FLLLRWVDELTAHLMLSGYWSP 286
           FLLLRWVDELTAHL+LSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_A5DE84 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 708

 Score = 34.7 bits (76), Expect = 0.48
 Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
 Frame = -1

Query: 224 SYNGCPTLQTETHY-CFTAETGRAVVPTRAD-SEQVLPPV 111
           SY+GC  LQ   H    ++ETG+ VVPT+ D SE+ L P+
Sbjct: 132 SYDGCLILQVYDHRNMISSETGKPVVPTKEDPSEKRLSPL 171


>UniRef50_Q8SV02 Cluster: Putative uncharacterized protein
           ECU07_0900; n=1; Encephalitozoon cuniculi|Rep: Putative
           uncharacterized protein ECU07_0900 - Encephalitozoon
           cuniculi
          Length = 372

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -3

Query: 201 SNRNALLLHGRNRQGGGTYPRGLRTGPTTSNYANYNF 91
           + RNALL+HG N  G  TY RGL    +   Y  + F
Sbjct: 112 TKRNALLVHGFNGSGNSTYMRGLAGHLSREGYRVFCF 148


>UniRef50_A4PIG5 Cluster: Ets transcription factor Elf; n=2; Ciona
           intestinalis|Rep: Ets transcription factor Elf - Ciona
           intestinalis (Transparent sea squirt)
          Length = 598

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 19/64 (29%), Positives = 31/64 (48%)
 Frame = -3

Query: 192 NALLLHGRNRQGGGTYPRGLRTGPTTSNYANYNFAGFTFITRCYSFTVEVNREHLMSTYF 13
           +A +L  RN+ G  TY R        S   +YN +G+ ++  C     E N+ H+ ST+ 
Sbjct: 399 SAKILFARNQSGLITYDRAQLKNSRCSVSVSYNRSGYQYMVDCRR---ENNKVHISSTWV 455

Query: 12  IRKI 1
             K+
Sbjct: 456 PEKV 459


>UniRef50_UPI0000E1F6E9 Cluster: PREDICTED: hypothetical protein;
           n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
           protein - Pan troglodytes
          Length = 539

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = -3

Query: 213 LPHPSNRNALLLHGRNRQGGGTYPRGLRTGPTTSNYANYNFAGFT 79
           L HP+NR +LLL      G G  P+   T P   +  N +F  FT
Sbjct: 359 LGHPNNRFSLLLRSPRPPGQGQMPKPHLTPPAQPHNPNPHFKTFT 403


>UniRef50_Q08BD9 Cluster: Zgc:153909; n=4; Danio rerio|Rep:
           Zgc:153909 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 262

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = -3

Query: 240 CKVSV*LQ-RLPHPSNRNALL-LHGRNRQGGGTYPRGLRTGPTTSNYAN 100
           CKV++ ++ RL HP  R  ++ LHG+ R GGG   RG+  G  T    N
Sbjct: 83  CKVNMNVKARLGHPVGRGGMMGLHGQMR-GGGRSRRGMVKGFCTKKSVN 130


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = -2

Query: 154 WYLPARTQNRSYHQ 113
           WYLPART  RSYH+
Sbjct: 572 WYLPARTHKRSYHR 585


>UniRef50_A4RP26 Cluster: Putative uncharacterized protein; n=1;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 400

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = -1

Query: 287 HRHLQRKCATHLEI*VV--RSQYSYNGCPTLQTETHYCFTAETGRAVVPTRADSEQVLPP 114
           H H  R C+T + +      S +S +G PT+Q +T    T        P  AD +   P 
Sbjct: 20  HHHGLRACSTCIRLTEAPDESAFSVHG-PTMQPQTASALTEIPTSTTKPAAADQQDKPPV 78

Query: 113 VITQIII 93
           VIT++ +
Sbjct: 79  VITEMAV 85


>UniRef50_A6M139 Cluster: von Willebrand factor, type A precursor;
           n=1; Clostridium beijerinckii NCIMB 8052|Rep: von
           Willebrand factor, type A precursor - Clostridium
           beijerinckii NCIMB 8052
          Length = 962

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 144 PRGLRTGPTTSNYANYNFAGFTF 76
           P G RTGP T NY  Y + G ++
Sbjct: 237 PSGYRTGPYTGNYTGYKYQGSSY 259


>UniRef50_Q2GPR0 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 549

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = -3

Query: 222 LQRLPHPSNRNALLLHG-RNRQGGGTYPRGLRTGPTTSNYANYNFAGFTFITRCYSFTVE 46
           L RL   +  ++   HG RN    GT P   RTGP  ++  N N  G     R  +F   
Sbjct: 14  LGRLHSSAGTSSFSTHGGRNPSDAGTRPSSSRTGPHRNHRNNNNNGGSGMQARFNNFIDS 73

Query: 45  VNRE 34
             RE
Sbjct: 74  FRRE 77


>UniRef50_Q2Y4Q3 Cluster: Putative uncharacterized protein C4_0035;
           n=1; uncultured archaeon|Rep: Putative uncharacterized
           protein C4_0035 - uncultured archaeon
          Length = 735

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -3

Query: 168 NRQGGGTYPRGLRTGPTTSNYANYNFAG 85
           N  G G Y RG+RTG T +N+  +N  G
Sbjct: 259 NSGGRGIYLRGVRTGSTIANFVVHNSVG 286



 Score = 30.7 bits (66), Expect = 7.7
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -3

Query: 168 NRQGGGTYPRGLRTGPTTSNYANYNFAG 85
           N  G G Y RG+RTG T +N+  +N  G
Sbjct: 408 NSGGRGIYLRGVRTGSTIANFVVHNSVG 435


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 401,905,112
Number of Sequences: 1657284
Number of extensions: 8059609
Number of successful extensions: 18307
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18304
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11941480628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)