Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16o08
         (356 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    26   0.10 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   1.2  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   1.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   2.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   5.0  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 26.2 bits (55), Expect = 0.10
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = +2

Query: 179 SSNAFRFEGWGSRCNYTETLQLISQGGWRI 268
           + N+ ++ G      Y E ++L  +GGW++
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWKV 313


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 301 WLLEPIDIYNVNAPPTLRYKL 239
           WL  P  + N   P +LR+KL
Sbjct: 7   WLTPPHSLGNTVTPVSLRFKL 27


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 7   SNEIRTHQMFTIDFHGEGI 63
           S++ RTHQ F ++   EGI
Sbjct: 371 SDKQRTHQPFLLNIPSEGI 389


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = -3

Query: 114 SNYANYNFAGFTFITRCYSFTVEVNREHLMSTYFIRK 4
           S+Y N + A F F+ R     + +   HL     I K
Sbjct: 413 SDYQNKSLAAFDFVARNSDTPIILWTSHLTQADVIEK 449


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +2

Query: 185 NAFRFEGWGSRCNYTETLQLISQGGW 262
           +A R+ G      Y E ++  + GGW
Sbjct: 290 DAGRYTGERGMMGYNEIVEAQNAGGW 315


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,292
Number of Sequences: 336
Number of extensions: 2102
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)