Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16o08
         (356 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81091-5|CAB03142.1|  768|Caenorhabditis elegans Hypothetical pr...    27   2.9  
AC084159-8|AAK39361.2|  655|Caenorhabditis elegans Hypothetical ...    27   2.9  
U00063-3|AAK18959.2|  446|Caenorhabditis elegans Hypothetical pr...    27   3.9  
AL132862-27|CAB60564.1|  682|Caenorhabditis elegans Hypothetical...    27   3.9  
L16685-3|AAA28169.3|  321|Caenorhabditis elegans Hypothetical pr...    26   6.7  
Z74043-2|CAA98545.1|  243|Caenorhabditis elegans Hypothetical pr...    26   8.9  
AL031635-11|CAA21038.3|  446|Caenorhabditis elegans Hypothetical...    26   8.9  
AL021482-2|CAA16339.1| 1003|Caenorhabditis elegans Hypothetical ...    26   8.9  

>Z81091-5|CAB03142.1|  768|Caenorhabditis elegans Hypothetical
           protein F55H12.1 protein.
          Length = 768

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 319 SPPDVKWLLEPIDIYNVNAPPTLRYKL*GLSIVTTAAPP 203
           +P   K  + P  +    APPT+R  +   ++ TT APP
Sbjct: 3   TPVSTKKTIAPSTMKTTVAPPTMRTTMAPTTMKTTVAPP 41


>AC084159-8|AAK39361.2|  655|Caenorhabditis elegans Hypothetical
           protein Y73B3A.3 protein.
          Length = 655

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 17/69 (24%), Positives = 27/69 (39%)
 Frame = -1

Query: 239 VRSQYSYNGCPTLQTETHYCFTAETGRAVVPTRADSEQVLPPVITQIIILRVSLLLHDVI 60
           VR+    + CP       +C  A     ++P     EQ     I  + IL  S L  D +
Sbjct: 259 VRNLPKRHSCPKYDRHEEFCGAANLDSPIMPRHLSDEQRSSDAIFNVPILVASGLAPDSL 318

Query: 59  PSPWKSIVN 33
               +S++N
Sbjct: 319 RITLESLLN 327


>U00063-3|AAK18959.2|  446|Caenorhabditis elegans Hypothetical
           protein F56C9.3 protein.
          Length = 446

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 233 TLQLISQGGWRIYVVDVYGLQ*PLNIRW 316
           ++QLI     RI+   VYG++ P+N+ W
Sbjct: 218 SVQLIISSVRRIHDAAVYGIKDPINVSW 245


>AL132862-27|CAB60564.1|  682|Caenorhabditis elegans Hypothetical
           protein Y73F8A.35 protein.
          Length = 682

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 150 YHRPACFCREAVMRF 194
           YHRP CFCR  +  F
Sbjct: 630 YHRPYCFCRNQINVF 644


>L16685-3|AAA28169.3|  321|Caenorhabditis elegans Hypothetical
           protein ZC21.3 protein.
          Length = 321

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -3

Query: 210 PHPSNRNALLLHGRNRQGGGTYPRGLRTGPTTSNYAN 100
           P  SN+N +L    N QG     +G+    TT  Y N
Sbjct: 164 PQSSNQNQVLRDQSNNQGYMNNNQGMYNTQTTQGYGN 200


>Z74043-2|CAA98545.1|  243|Caenorhabditis elegans Hypothetical
           protein T19B10.4a protein.
          Length = 243

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -3

Query: 204 PSNRNALLLHGRNRQGGGTYPRGLRTGPTTSNY 106
           P N N    +G+NR+ G     G R G   S Y
Sbjct: 88  PPNGNMNFFNGQNRRNGSGKNNGNRNGAPPSGY 120


>AL031635-11|CAA21038.3|  446|Caenorhabditis elegans Hypothetical
           protein Y47D3B.3 protein.
          Length = 446

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -2

Query: 130 NRSYHQ*LRKL*FCGFHFYYTMLFLHRGSQS*TFDEYVF 14
           N +Y      L    F F++  +F H   QS +FD+ VF
Sbjct: 68  NHTYISHYATLSLSSFSFFFRHIFPHLPQQSTSFDQEVF 106


>AL021482-2|CAA16339.1| 1003|Caenorhabditis elegans Hypothetical
            protein Y39A1B.2 protein.
          Length = 1003

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -2

Query: 307  VKWLLEPIDIYNVNAPPTLRYKL*GLSIVTTAAPPF-KPKRITASRQKQ 164
            +++L  P D+Y +  PP++ Y L  L    T + P   P  +T S +++
Sbjct: 891  IQFLSNP-DLYTMPPPPSVEYSLSTLEFNRTQSRPLGAPPALTGSPKRE 938


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,157,348
Number of Sequences: 27780
Number of extensions: 189877
Number of successful extensions: 400
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 400
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)