Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16o02
         (708 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315...    75   6e-14
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162...    75   7e-14
07_01_0546 - 4024282-4024291,4024486-4024550,4024739-4024904,402...    30   1.6  
10_08_0047 + 14430437-14430463,14430615-14430714,14431076-144311...    28   6.3  
06_03_0930 - 26038341-26038508,26039114-26039254,26040799-260408...    28   6.3  
05_06_0144 - 25973635-25973801,25973878-25973947,25974049-259741...    28   8.4  

>01_06_0458 +
           29531069-29531126,29531247-29531302,29531407-29531505,
           29531989-29532048,29532285-29532396,29532459-29532694,
           29533092-29533220,29533325-29533462,29534043-29534193,
           29534394-29534476,29534658-29534705,29534828-29534881,
           29534971-29535054,29535152-29535337
          Length = 497

 Score = 74.9 bits (176), Expect = 6e-14
 Identities = 29/51 (56%), Positives = 40/51 (78%)
 Frame = +2

Query: 2   KNFITQGNYENRTVFESLDIGWQLLRIFPKEMLKRIPASTLAEFYPRDSRH 154
           + F+TQG Y+ R +F+SLD+ W LLRIFP+E+L RIPA TL ++Y RD+ H
Sbjct: 447 RKFVTQGAYDTRNIFQSLDLAWSLLRIFPRELLHRIPAKTLDQYYSRDASH 497


>06_03_0510 -
           21615724-21615909,21615992-21616075,21616164-21616217,
           21616324-21616371,21616529-21616611,21616963-21617113,
           21617648-21617785,21617966-21618094,21618391-21618596,
           21618734-21618845,21619145-21619204,21619331-21619429,
           21619520-21619575,21620230-21620313,21621407-21621500
          Length = 527

 Score = 74.5 bits (175), Expect = 7e-14
 Identities = 29/51 (56%), Positives = 40/51 (78%)
 Frame = +2

Query: 2   KNFITQGNYENRTVFESLDIGWQLLRIFPKEMLKRIPASTLAEFYPRDSRH 154
           + F+TQG Y+ R +F+SLD+ W LLRIFP+E+L RIPA TL ++Y RD+ H
Sbjct: 477 RKFVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQYYSRDATH 527


>07_01_0546 -
           4024282-4024291,4024486-4024550,4024739-4024904,
           4025012-4025160,4025332-4025440,4025532-4025725,
           4025839-4025974,4026123-4026623,4026709-4026813,
           4027023-4027113,4027325-4027411,4028038-4028128,
           4028307-4028336
          Length = 577

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = -2

Query: 257 WYGNTKFITHHIISYC*CRGQFRTHS--RALQGCRLNGGSLSGRIRPGWKPGYVSASPWG 84
           W G+  +     +SYC  R     H+  + L+  +L      GR+  GWK G +   P  
Sbjct: 416 WLGDLNY--RIALSYCSARALVEMHNWKQLLEKDQLRIQQRYGRVFQGWKEGRIYFPPTY 473

Query: 83  RYAATASRCPG 51
           +Y+  + R  G
Sbjct: 474 KYSFNSDRYAG 484


>10_08_0047 +
           14430437-14430463,14430615-14430714,14431076-14431153,
           14431340-14431427,14431536-14431640,14431998-14432540,
           14433023-14433157,14433256-14433364,14433578-14433726,
           14433800-14434046
          Length = 526

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = -2

Query: 197 QFRTHSRALQGCRLNGGSLSGRIRPGWKPGYVSASPWGRYAATASRCPG 51
           + R     L+  +L      GR+ PGW  G +   P  +Y+  + R  G
Sbjct: 383 EMRNWKALLEKDQLRSEQRGGRVFPGWNEGRIYFPPTYKYSNNSDRYAG 431


>06_03_0930 -
           26038341-26038508,26039114-26039254,26040799-26040858,
           26040972-26041034,26041444-26041454,26041722-26041802,
           26042783-26043020,26043563-26043997
          Length = 398

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = +1

Query: 52  PGHRLAVAAYLPQGDAETYPGFHPGRILPERLPPLSLQPWSA--RECVLNCP 201
           P  R+ +    P          H GR +P RLP  SLQP +A  R C + CP
Sbjct: 143 PAKRVCLVRLTPTLRRGAAAAIHKGRWVPVRLPLPSLQPRAAAYRFCPI-CP 193


>05_06_0144 -
           25973635-25973801,25973878-25973947,25974049-25974190,
           25974647-25974827,25975248-25975443
          Length = 251

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = -3

Query: 193 SEHIHEHSKVAGLMAGVSRVEFGQGGSRDTFQHLLGEDTQQLPADVQGL 47
           +EH  E S V  +M  +S    G+GGS  +     GE T  L A +  L
Sbjct: 2   AEHKEEESLVESVMDKISDKLHGRGGSSSSSSDSDGERTADLKAKIYRL 50


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,767,631
Number of Sequences: 37544
Number of extensions: 279862
Number of successful extensions: 792
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)