Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16n23
         (300 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_07_0168 + 13758189-13758418,13758888-13759041,13760576-137610...    28   1.2  

>10_07_0168 +
           13758189-13758418,13758888-13759041,13760576-13761042,
           13761361-13761478,13761566-13761622,13761906-13762082,
           13762225-13762365,13762458-13762531,13764583-13764738,
           13764822-13764895,13764992-13765068
          Length = 574

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 8/53 (15%)
 Frame = -2

Query: 266 KEHYMQKEVTGDIFLKN-----FTGYLIEQRWKFVY---KKYIYISLCSQFPC 132
           K+   Q EVT  + LK+     FTGY  E RW+ +    KKY+ + +  +  C
Sbjct: 14  KDDKFQNEVTFLMDLKHPNIVRFTGYCAESRWEVLQVNGKKYVMVEMPRRLLC 66


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,031,339
Number of Sequences: 37544
Number of extensions: 93142
Number of successful extensions: 127
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 339576272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)