Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16n16
(646 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X84849-1|CAA59284.1| 158|Homo sapiens p27 kip1 protein. 42 0.002
U10906-1|AAA20240.1| 198|Homo sapiens p27kip1 protein. 42 0.002
S76988-1|AAD14244.1| 198|Homo sapiens p27Kip1 protein. 42 0.002
CR457399-1|CAG33680.1| 198|Homo sapiens CDKN1B protein. 42 0.002
BT019554-1|AAV38361.1| 198|Homo sapiens cyclin-dependent kinase... 42 0.002
BT019553-1|AAV38360.1| 198|Homo sapiens cyclin-dependent kinase... 42 0.002
BC001971-1|AAH01971.1| 198|Homo sapiens cyclin-dependent kinase... 42 0.002
AY004255-1|AAF88142.1| 198|Homo sapiens cdk inhibitor p27KIP1 p... 42 0.002
AJ616234-1|CAE82383.1| 136|Homo sapiens cyclin-dependent kinase... 42 0.002
AF480891-1|AAL78041.1| 198|Homo sapiens cyclin-dependent kinase... 42 0.002
AF247551-1|AAF69497.1| 198|Homo sapiens cyclin-dependent kinase... 42 0.002
Z85996-2|CAB06656.1| 164|Homo sapiens cyclin-dependent kinase i... 34 0.38
U09579-1|AAA85641.1| 164|Homo sapiens mda-6 protein. 34 0.38
U03106-1|AAC04313.1| 164|Homo sapiens WAF1 protein. 34 0.38
S67388-1|AAB29246.1| 164|Homo sapiens p21 protein. 34 0.38
L47233-1|AAB59560.1| 181|Homo sapiens cyclin-dependent kinase p... 34 0.38
L47232-1|AAB59559.1| 181|Homo sapiens cyclin-dependent kinase p... 34 0.38
L26165-1|AAA19811.1| 164|Homo sapiens protein ( Human DNA synth... 34 0.38
L25610-1|AAA16109.1| 164|Homo sapiens cyclin-dependent kinase i... 34 0.38
CR536533-1|CAG38770.1| 164|Homo sapiens CDKN1A protein. 34 0.38
BT006719-1|AAP35365.1| 164|Homo sapiens cyclin-dependent kinase... 34 0.38
BC013967-1|AAH13967.1| 164|Homo sapiens cyclin-dependent kinase... 34 0.38
BC001935-1|AAH01935.1| 164|Homo sapiens cyclin-dependent kinase... 34 0.38
BC000312-1|AAH00312.1| 164|Homo sapiens cyclin-dependent kinase... 34 0.38
BC000275-1|AAH00275.1| 164|Homo sapiens cyclin-dependent kinase... 34 0.38
AY008263-1|AAG15411.1| 164|Homo sapiens cyclin-dependent kinase... 34 0.38
AF497972-1|AAM11787.1| 164|Homo sapiens cyclin-dependent kinase... 34 0.38
AB209881-1|BAD93118.1| 191|Homo sapiens Cyclin-dependent kinase... 34 0.38
AB007510-1|BAA22563.1| 2335|Homo sapiens PRP8 protein protein. 33 0.87
AK055233-1|BAB70882.1| 473|Homo sapiens protein ( Homo sapiens ... 32 2.0
Y09077-1|CAA70298.1| 2644|Homo sapiens atr protein. 31 2.7
U76308-1|AAC50929.1| 2644|Homo sapiens protein kinase ATR protein. 31 2.7
U49844-1|AAC50405.1| 2644|Homo sapiens FRAP-related protein prot... 31 2.7
BC064370-1|AAH64370.1| 2335|Homo sapiens PRP8 pre-mRNA processin... 31 2.7
BC000579-1|AAH00579.1| 267|Homo sapiens PRPF8 protein protein. 31 2.7
AF092565-1|AAC61776.1| 2335|Homo sapiens splicing factor Prp8 pr... 31 2.7
AB208847-1|BAD92084.1| 456|Homo sapiens ataxia telangiectasia a... 31 2.7
BC033759-1|AAH33759.1| 256|Homo sapiens MIF4G domain containing... 30 6.1
>X84849-1|CAA59284.1| 158|Homo sapiens p27 kip1 protein.
Length = 158
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 215 ESIARDREE-KKRKFNFDFENEVPLDGVYEWYRTD 316
E RD EE +RK+NFDF+N PL+G YEW +
Sbjct: 46 EKHCRDMEEASQRKWNFDFQNHKPLEGKYEWQEVE 80
>U10906-1|AAA20240.1| 198|Homo sapiens p27kip1 protein.
Length = 198
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 215 ESIARDREE-KKRKFNFDFENEVPLDGVYEWYRTD 316
E RD EE +RK+NFDF+N PL+G YEW +
Sbjct: 46 EKHCRDMEEASQRKWNFDFQNHKPLEGKYEWQEVE 80
>S76988-1|AAD14244.1| 198|Homo sapiens p27Kip1 protein.
Length = 198
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 215 ESIARDREE-KKRKFNFDFENEVPLDGVYEWYRTD 316
E RD EE +RK+NFDF+N PL+G YEW +
Sbjct: 46 EKHCRDMEEASQRKWNFDFQNHKPLEGKYEWQEVE 80
>CR457399-1|CAG33680.1| 198|Homo sapiens CDKN1B protein.
Length = 198
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 215 ESIARDREE-KKRKFNFDFENEVPLDGVYEWYRTD 316
E RD EE +RK+NFDF+N PL+G YEW +
Sbjct: 46 EKHCRDMEEASQRKWNFDFQNHKPLEGKYEWQEVE 80
>BT019554-1|AAV38361.1| 198|Homo sapiens cyclin-dependent kinase
inhibitor 1B (p27, Kip1) protein.
Length = 198
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 215 ESIARDREE-KKRKFNFDFENEVPLDGVYEWYRTD 316
E RD EE +RK+NFDF+N PL+G YEW +
Sbjct: 46 EKHCRDMEEASQRKWNFDFQNHKPLEGKYEWQEVE 80
>BT019553-1|AAV38360.1| 198|Homo sapiens cyclin-dependent kinase
inhibitor 1B (p27, Kip1) protein.
Length = 198
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 215 ESIARDREE-KKRKFNFDFENEVPLDGVYEWYRTD 316
E RD EE +RK+NFDF+N PL+G YEW +
Sbjct: 46 EKHCRDMEEASQRKWNFDFQNHKPLEGKYEWQEVE 80
>BC001971-1|AAH01971.1| 198|Homo sapiens cyclin-dependent kinase
inhibitor 1B (p27, Kip1) protein.
Length = 198
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 215 ESIARDREE-KKRKFNFDFENEVPLDGVYEWYRTD 316
E RD EE +RK+NFDF+N PL+G YEW +
Sbjct: 46 EKHCRDMEEASQRKWNFDFQNHKPLEGKYEWQEVE 80
>AY004255-1|AAF88142.1| 198|Homo sapiens cdk inhibitor p27KIP1
protein.
Length = 198
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 215 ESIARDREE-KKRKFNFDFENEVPLDGVYEWYRTD 316
E RD EE +RK+NFDF+N PL+G YEW +
Sbjct: 46 EKHCRDMEEASQRKWNFDFQNHKPLEGKYEWQEVE 80
>AJ616234-1|CAE82383.1| 136|Homo sapiens cyclin-dependent kinase
inhibitor 1B protein.
Length = 136
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 215 ESIARDREE-KKRKFNFDFENEVPLDGVYEWYRTD 316
E RD EE +RK+NFDF+N PL+G YEW +
Sbjct: 44 EKHCRDMEEASQRKWNFDFQNHKPLEGKYEWQEVE 78
>AF480891-1|AAL78041.1| 198|Homo sapiens cyclin-dependent kinase
inhibitor 1B (p27, Kip1) protein.
Length = 198
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 215 ESIARDREE-KKRKFNFDFENEVPLDGVYEWYRTD 316
E RD EE +RK+NFDF+N PL+G YEW +
Sbjct: 46 EKHCRDMEEASQRKWNFDFQNHKPLEGKYEWQEVE 80
>AF247551-1|AAF69497.1| 198|Homo sapiens cyclin-dependent kinase
inhibitor p27kip1 protein.
Length = 198
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 215 ESIARDREE-KKRKFNFDFENEVPLDGVYEWYRTD 316
E RD EE +RK+NFDF+N PL+G YEW +
Sbjct: 46 EKHCRDMEEASQRKWNFDFQNHKPLEGKYEWQEVE 80
>Z85996-2|CAB06656.1| 164|Homo sapiens cyclin-dependent kinase
inhibitor 1A (p21, Cip1) protein.
Length = 164
Score = 34.3 bits (75), Expect = 0.38
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 236 EEKKRKFNFDFENEVPLDGVYEWYRTDGV 322
+E + ++NFDF E PL+G + W R G+
Sbjct: 43 QEARERWNFDFVTETPLEGDFAWERVRGL 71
>U09579-1|AAA85641.1| 164|Homo sapiens mda-6 protein.
Length = 164
Score = 34.3 bits (75), Expect = 0.38
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 236 EEKKRKFNFDFENEVPLDGVYEWYRTDGV 322
+E + ++NFDF E PL+G + W R G+
Sbjct: 43 QEARERWNFDFVTETPLEGDFAWERVRGL 71
>U03106-1|AAC04313.1| 164|Homo sapiens WAF1 protein.
Length = 164
Score = 34.3 bits (75), Expect = 0.38
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 236 EEKKRKFNFDFENEVPLDGVYEWYRTDGV 322
+E + ++NFDF E PL+G + W R G+
Sbjct: 43 QEARERWNFDFVTETPLEGDFAWERVRGL 71
>S67388-1|AAB29246.1| 164|Homo sapiens p21 protein.
Length = 164
Score = 34.3 bits (75), Expect = 0.38
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 236 EEKKRKFNFDFENEVPLDGVYEWYRTDGV 322
+E + ++NFDF E PL+G + W R G+
Sbjct: 43 QEARERWNFDFVTETPLEGDFAWERVRGL 71
>L47233-1|AAB59560.1| 181|Homo sapiens cyclin-dependent kinase
protein.
Length = 181
Score = 34.3 bits (75), Expect = 0.38
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 236 EEKKRKFNFDFENEVPLDGVYEWYRTDGV 322
+E + ++NFDF E PL+G + W R G+
Sbjct: 60 QEARERWNFDFVTETPLEGDFAWERVRGL 88
>L47232-1|AAB59559.1| 181|Homo sapiens cyclin-dependent kinase
protein.
Length = 181
Score = 34.3 bits (75), Expect = 0.38
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 236 EEKKRKFNFDFENEVPLDGVYEWYRTDGV 322
+E + ++NFDF E PL+G + W R G+
Sbjct: 60 QEARERWNFDFVTETPLEGDFAWERVRGL 88
>L26165-1|AAA19811.1| 164|Homo sapiens protein ( Human DNA
synthesis inhibitor mRNA, complete cds. ).
Length = 164
Score = 34.3 bits (75), Expect = 0.38
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 236 EEKKRKFNFDFENEVPLDGVYEWYRTDGV 322
+E + ++NFDF E PL+G + W R G+
Sbjct: 43 QEARERWNFDFVTETPLEGDFAWERVRGL 71
>L25610-1|AAA16109.1| 164|Homo sapiens cyclin-dependent kinase
inhibitor protein.
Length = 164
Score = 34.3 bits (75), Expect = 0.38
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 236 EEKKRKFNFDFENEVPLDGVYEWYRTDGV 322
+E + ++NFDF E PL+G + W R G+
Sbjct: 43 QEARERWNFDFVTETPLEGDFAWERVRGL 71
>CR536533-1|CAG38770.1| 164|Homo sapiens CDKN1A protein.
Length = 164
Score = 34.3 bits (75), Expect = 0.38
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 236 EEKKRKFNFDFENEVPLDGVYEWYRTDGV 322
+E + ++NFDF E PL+G + W R G+
Sbjct: 43 QEARERWNFDFVTETPLEGDFAWERVRGL 71
>BT006719-1|AAP35365.1| 164|Homo sapiens cyclin-dependent kinase
inhibitor 1A (p21, Cip1) protein.
Length = 164
Score = 34.3 bits (75), Expect = 0.38
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 236 EEKKRKFNFDFENEVPLDGVYEWYRTDGV 322
+E + ++NFDF E PL+G + W R G+
Sbjct: 43 QEARERWNFDFVTETPLEGDFAWERVRGL 71
>BC013967-1|AAH13967.1| 164|Homo sapiens cyclin-dependent kinase
inhibitor 1A (p21, Cip1) protein.
Length = 164
Score = 34.3 bits (75), Expect = 0.38
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 236 EEKKRKFNFDFENEVPLDGVYEWYRTDGV 322
+E + ++NFDF E PL+G + W R G+
Sbjct: 43 QEARERWNFDFVTETPLEGDFAWERVRGL 71
>BC001935-1|AAH01935.1| 164|Homo sapiens cyclin-dependent kinase
inhibitor 1A (p21, Cip1) protein.
Length = 164
Score = 34.3 bits (75), Expect = 0.38
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 236 EEKKRKFNFDFENEVPLDGVYEWYRTDGV 322
+E + ++NFDF E PL+G + W R G+
Sbjct: 43 QEARERWNFDFVTETPLEGDFAWERVRGL 71
>BC000312-1|AAH00312.1| 164|Homo sapiens cyclin-dependent kinase
inhibitor 1A (p21, Cip1) protein.
Length = 164
Score = 34.3 bits (75), Expect = 0.38
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 236 EEKKRKFNFDFENEVPLDGVYEWYRTDGV 322
+E + ++NFDF E PL+G + W R G+
Sbjct: 43 QEARERWNFDFVTETPLEGDFAWERVRGL 71
>BC000275-1|AAH00275.1| 164|Homo sapiens cyclin-dependent kinase
inhibitor 1A (p21, Cip1) protein.
Length = 164
Score = 34.3 bits (75), Expect = 0.38
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 236 EEKKRKFNFDFENEVPLDGVYEWYRTDGV 322
+E + ++NFDF E PL+G + W R G+
Sbjct: 43 QEARERWNFDFVTETPLEGDFAWERVRGL 71
>AY008263-1|AAG15411.1| 164|Homo sapiens cyclin-dependent kinase
inhibitor isoform protein.
Length = 164
Score = 34.3 bits (75), Expect = 0.38
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 236 EEKKRKFNFDFENEVPLDGVYEWYRTDGV 322
+E + ++NFDF E PL+G + W R G+
Sbjct: 43 QEARERWNFDFVTETPLEGDFAWERVRGL 71
>AF497972-1|AAM11787.1| 164|Homo sapiens cyclin-dependent kinase
inhibitor 1A (p21, Cip1) protein.
Length = 164
Score = 34.3 bits (75), Expect = 0.38
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 236 EEKKRKFNFDFENEVPLDGVYEWYRTDGV 322
+E + ++NFDF E PL+G + W R G+
Sbjct: 43 QEARERWNFDFVTETPLEGDFAWERVRGL 71
>AB209881-1|BAD93118.1| 191|Homo sapiens Cyclin-dependent kinase
variant protein.
Length = 191
Score = 34.3 bits (75), Expect = 0.38
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 236 EEKKRKFNFDFENEVPLDGVYEWYRTDGV 322
+E + ++NFDF E PL+G + W R G+
Sbjct: 70 QEARERWNFDFVTETPLEGDFAWERVRGL 98
>AB007510-1|BAA22563.1| 2335|Homo sapiens PRP8 protein protein.
Length = 2335
Score = 33.1 bits (72), Expect = 0.87
Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Frame = +2
Query: 128 PNNPVRRCLFPVDDLTEQAKIDNFANVLRESIARDREEKKRKFNF-DFENE-VPLDGVYE 301
P NPV L P+ D + K+ A ++ A+ R +KRKF F D + E +P + V E
Sbjct: 10 PGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAK-RYAEKRKFGFVDAQKEDMPPEHVRE 68
Query: 302 WYRTDG--VNDWIAVKKDPCTDVIKEKPDA-LKQLENESTP 415
R G N K +K P A LK LEN P
Sbjct: 69 IIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMP 109
>AK055233-1|BAB70882.1| 473|Homo sapiens protein ( Homo sapiens
cDNA FLJ30671 fis, clone FCBBF1000687, moderately
similar to Mus musculus Rap2 interacting protein 8
(RPIP8) mRNA. ).
Length = 473
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/92 (20%), Positives = 42/92 (45%)
Frame = +2
Query: 143 RRCLFPVDDLTEQAKIDNFANVLRESIARDREEKKRKFNFDFENEVPLDGVYEWYRTDGV 322
R C +DD + + +NFA +L + ++ +E + + ++PL G W+ +
Sbjct: 50 RSCFETIDDSSPE--FNNFAAILEQILSHRLKEISQSCRWLAHLQIPLQGQVTWFGYESP 107
Query: 323 NDWIAVKKDPCTDVIKEKPDALKQLENESTPR 418
+ + C V + +++ +EN S+ R
Sbjct: 108 RSFWDYIRVACRKVSQNCICSIENMENVSSSR 139
>Y09077-1|CAA70298.1| 2644|Homo sapiens atr protein.
Length = 2644
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 158 PVDDLTEQAKIDNFANVLRESIARDREEKKRKFNFDFENEVPLD---GVYEW 304
P DDL + ++ F +++ + + +D E ++R+ + +PL+ G+ EW
Sbjct: 2328 PKDDLRKDCRLMEFNSLINKCLRKDAESRRRELHIRTYAVIPLNDECGIIEW 2379
>U76308-1|AAC50929.1| 2644|Homo sapiens protein kinase ATR protein.
Length = 2644
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 158 PVDDLTEQAKIDNFANVLRESIARDREEKKRKFNFDFENEVPLD---GVYEW 304
P DDL + ++ F +++ + + +D E ++R+ + +PL+ G+ EW
Sbjct: 2328 PKDDLRKDCRLMEFNSLINKCLRKDAESRRRELHIRTYAVIPLNDECGIIEW 2379
>U49844-1|AAC50405.1| 2644|Homo sapiens FRAP-related protein protein.
Length = 2644
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 158 PVDDLTEQAKIDNFANVLRESIARDREEKKRKFNFDFENEVPLD---GVYEW 304
P DDL + ++ F +++ + + +D E ++R+ + +PL+ G+ EW
Sbjct: 2328 PKDDLRKDCRLMEFNSLINKCLRKDAESRRRELHIRTYAVIPLNDECGIIEW 2379
>BC064370-1|AAH64370.1| 2335|Homo sapiens PRP8 pre-mRNA processing
factor 8 homolog (S. cerevisiae) protein.
Length = 2335
Score = 31.5 bits (68), Expect = 2.7
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Frame = +2
Query: 128 PNNPVRRCLFPVDDLTEQAKIDNFANVLRESIARDREEKKRKFNF-DFENE-VPLDGVYE 301
P NPV L P+ D + K+ A ++ A+ R +KRKF F D + E +P + V +
Sbjct: 10 PGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAK-RYAEKRKFGFVDAQKEDMPPEHVRK 68
Query: 302 WYRTDG--VNDWIAVKKDPCTDVIKEKPDA-LKQLENESTP 415
R G N K +K P A LK LEN P
Sbjct: 69 IIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMP 109
>BC000579-1|AAH00579.1| 267|Homo sapiens PRPF8 protein protein.
Length = 267
Score = 31.5 bits (68), Expect = 2.7
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Frame = +2
Query: 128 PNNPVRRCLFPVDDLTEQAKIDNFANVLRESIARDREEKKRKFNF-DFENE-VPLDGVYE 301
P NPV L P+ D + K+ A ++ A+ R +KRKF F D + E +P + V +
Sbjct: 10 PGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAK-RYAEKRKFGFVDAQKEDMPPEHVRK 68
Query: 302 WYRTDG--VNDWIAVKKDPCTDVIKEKPDA-LKQLENESTP 415
R G N K +K P A LK LEN P
Sbjct: 69 IIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMP 109
>AF092565-1|AAC61776.1| 2335|Homo sapiens splicing factor Prp8
protein.
Length = 2335
Score = 31.5 bits (68), Expect = 2.7
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Frame = +2
Query: 128 PNNPVRRCLFPVDDLTEQAKIDNFANVLRESIARDREEKKRKFNF-DFENE-VPLDGVYE 301
P NPV L P+ D + K+ A ++ A+ R +KRKF F D + E +P + V +
Sbjct: 10 PGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAK-RYAEKRKFGFVDAQKEDMPPEHVRK 68
Query: 302 WYRTDG--VNDWIAVKKDPCTDVIKEKPDA-LKQLENESTP 415
R G N K +K P A LK LEN P
Sbjct: 69 IIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMP 109
>AB208847-1|BAD92084.1| 456|Homo sapiens ataxia telangiectasia and
Rad3 related protein variant protein.
Length = 456
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 158 PVDDLTEQAKIDNFANVLRESIARDREEKKRKFNFDFENEVPLD---GVYEW 304
P DDL + ++ F +++ + + +D E ++R+ + +PL+ G+ EW
Sbjct: 174 PKDDLRKDCRLMEFNSLINKCLRKDAESRRRELHIRTYAVIPLNDECGIIEW 225
>BC033759-1|AAH33759.1| 256|Homo sapiens MIF4G domain containing
protein.
Length = 256
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +2
Query: 80 CRNIDYLEIPKMRTMSPNNPVRRCLFPV---DDLTEQAKID 193
C DYL + M M+ NPV CLF + D L+++ ++D
Sbjct: 143 CNIFDYLRVNNMPMMALVNPVYDCLFRLAQPDSLSKEEEVD 183
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,890,574
Number of Sequences: 237096
Number of extensions: 1385826
Number of successful extensions: 3569
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 3460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3569
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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