Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16n10
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061476-1|AAL29024.1|  256|Drosophila melanogaster LD44179p pro...    29   5.5  
AE014296-2752|AAF49451.1|  256|Drosophila melanogaster CG4229-PA...    29   5.5  
BT016051-1|AAV36936.1| 1132|Drosophila melanogaster LP17541p pro...    28   9.6  
AE014298-797|AAF46083.2| 1132|Drosophila melanogaster CG3108-PA ...    28   9.6  

>AY061476-1|AAL29024.1|  256|Drosophila melanogaster LD44179p
           protein.
          Length = 256

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +1

Query: 355 ESITNALPIKLSRRTTPPKKESPMKIETLQKFAP-ELVPKNTVEIVSIPNQVLE 513
           E + +A   K++R   PP + +P   ET +  AP E      V++ ++  Q+L+
Sbjct: 144 EEVVSAAEPKVNREYLPPTEAAPAAEETTEAAAPEEPADVRVVDVPTVSGQLLQ 197


>AE014296-2752|AAF49451.1|  256|Drosophila melanogaster CG4229-PA
           protein.
          Length = 256

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +1

Query: 355 ESITNALPIKLSRRTTPPKKESPMKIETLQKFAP-ELVPKNTVEIVSIPNQVLE 513
           E + +A   K++R   PP + +P   ET +  AP E      V++ ++  Q+L+
Sbjct: 144 EEVVSAAEPKVNREYLPPTEAAPAAEETTEAAAPEEPADVRVVDVPTVSGQLLQ 197


>BT016051-1|AAV36936.1| 1132|Drosophila melanogaster LP17541p
           protein.
          Length = 1132

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 19/61 (31%), Positives = 33/61 (54%)
 Frame = +1

Query: 406 PKKESPMKIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEKAVDNVISMTEVSVTETIA 585
           P+ ++ ++ +   +  PE   ++  E  S P +  E VEAEK  DN +  TE S+ ET+ 
Sbjct: 323 PETQAEVEAQPEVESLPEA--ESQPEAESQPEREPE-VEAEKISDNEVDTTEASLMETLV 379

Query: 586 K 588
           +
Sbjct: 380 E 380


>AE014298-797|AAF46083.2| 1132|Drosophila melanogaster CG3108-PA
           protein.
          Length = 1132

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 19/61 (31%), Positives = 33/61 (54%)
 Frame = +1

Query: 406 PKKESPMKIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEKAVDNVISMTEVSVTETIA 585
           P+ ++ ++ +   +  PE   ++  E  S P +  E VEAEK  DN +  TE S+ ET+ 
Sbjct: 323 PETQAEVEAQPEVESLPEA--ESQPEAESQPEREPE-VEAEKISDNEVDTTEASLMETLV 379

Query: 586 K 588
           +
Sbjct: 380 E 380


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,303,621
Number of Sequences: 53049
Number of extensions: 405544
Number of successful extensions: 1172
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)