Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16n10
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   2.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   2.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   2.6  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   4.5  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    22   4.5  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 404 GVVLLDNFMGNAFVILSIIVW 342
           G ++L   +GNA VILS+  +
Sbjct: 44  GFLVLATVLGNALVILSVFTY 64


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 404 GVVLLDNFMGNAFVILSIIVW 342
           G ++L   +GNA VILS+  +
Sbjct: 44  GFLVLATVLGNALVILSVFTY 64


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 404 GVVLLDNFMGNAFVILSIIVW 342
           G ++L   +GNA VILS+  +
Sbjct: 44  GFLVLATVLGNALVILSVFTY 64


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -1

Query: 449 NFCNVSIFIGDSFLGGVVLLDNFMGNAFVILS 354
           N C  SI +   F   V   DN + NAF  L+
Sbjct: 111 NTCQPSIPLEPDFTSDVTERDNHLVNAFKTLT 142


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 187 GNVFPLSNVEKKAP 146
           GN FP+  VEK++P
Sbjct: 292 GNNFPVYQVEKRSP 305


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,914
Number of Sequences: 438
Number of extensions: 3368
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)