Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16n01
(680 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88167-3|AAB42224.2| 363|Caenorhabditis elegans Hypothetical pr... 62 3e-10
AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical ... 46 3e-05
L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical pr... 35 0.062
U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfi... 31 0.76
U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfi... 31 0.76
U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfi... 31 0.76
AF250045-1|AAG17620.1| 246|Caenorhabditis elegans thioredoxin-l... 31 1.0
AF125955-2|AAD14719.1| 246|Caenorhabditis elegans Dumpy : short... 31 1.0
U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily ass... 30 1.3
AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical... 30 1.3
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 30 1.3
AC024214-15|AAM97983.1| 544|Caenorhabditis elegans Hypothetical... 29 4.1
AC024214-14|AAU87808.1| 644|Caenorhabditis elegans Hypothetical... 29 4.1
AF000191-1|AAB52884.1| 533|Caenorhabditis elegans Hypothetical ... 28 5.4
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF043704-1|AAK21475.1| 487|Caenorhabditis elegans Hypothetical ... 28 7.1
Z73905-4|CAI91175.1| 536|Caenorhabditis elegans Hypothetical pr... 27 9.4
>U88167-3|AAB42224.2| 363|Caenorhabditis elegans Hypothetical
protein D2092.4 protein.
Length = 363
Score = 62.5 bits (145), Expect = 3e-10
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Frame = +2
Query: 284 KQNCETCKKLEQHVESLQEDFKKHLNAMSVKTVNSHLARLYNPSKEPALIFYRHGVALLY 463
K C TC + VE + +D + VKT + +AR + P+L++YR +LY
Sbjct: 104 KVPCPTCTEALSEVEEIDDDIEATGYVQVVKTNDRSVARELGINVFPSLVYYRRKNPILY 163
Query: 464 SGEADENE-IYGFFEKNQTPAVKELTDKIFEHLTQA-ATGATTGDWFVMFYGAACVECQR 637
G+ ++E + + ++ A +LTD FE T + + + DWFVMFY A
Sbjct: 164 DGDFKDSETLLRWLRAHEEVATWDLTDDTFESRTDSHSPDEGSIDWFVMFYDADEGNSNA 223
Query: 638 LHAVWESVGATLK 676
+WE+V L+
Sbjct: 224 FVPLWETVAHKLR 236
>AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical
protein ZK973.11 protein.
Length = 447
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/62 (38%), Positives = 31/62 (50%)
Frame = +2
Query: 488 IYGFFEKNQTPAVKELTDKIFEHLTQAATGATTGDWFVMFYGAACVECQRLHAVWESVGA 667
+Y N AV +L+DK + + G WFV FY C C+RLH VW+ VG
Sbjct: 18 VYDTEATNPPTAVLDLSDKFLDVKDE-------GMWFVEFYAPWCAHCKRLHPVWDQVGH 70
Query: 668 TL 673
TL
Sbjct: 71 TL 72
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/50 (20%), Positives = 26/50 (52%)
Frame = +2
Query: 422 PALIFYRHGVALLYSGEADENEIYGFFEKNQTPAVKELTDKIFEHLTQAA 571
P ++F+R+G + Y G ++ + F ++ P ++ + + E + +A
Sbjct: 102 PTILFFRNGHVIDYRGGREKEALVSFAKRCAAPIIEVINENQIEKVKLSA 151
>L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical
protein C14B9.2 protein.
Length = 618
Score = 34.7 bits (76), Expect = 0.062
Identities = 31/132 (23%), Positives = 49/132 (37%), Gaps = 3/132 (2%)
Frame = +2
Query: 293 CETCKKLEQHVESLQEDFKKHLNAMSVKTVNSHLARLYNPSKEPALIFYRHGVALL-YSG 469
C CK L E L + TV + L + + P L F++ G Y G
Sbjct: 65 CGHCKHLAPEYEKASSKVSIPLAKVDA-TVETELGKRFEIQGYPTLKFWKDGKGPNDYDG 123
Query: 470 EADENEIYGFFEKNQTPAVKELTDKIFEHLTQAATGATTGDWFVM--FYGAACVECQRLH 643
DE I + E P K +++ T+ + + V+ FY C C++L
Sbjct: 124 GRDEAGIVEWVESRVDPNYKPPPEEVVTLTTENFDDFISNNELVLVEFYAPWCGHCKKLA 183
Query: 644 AVWESVGATLKS 679
+E LK+
Sbjct: 184 PEYEKAAQKLKA 195
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Frame = +2
Query: 293 CETCKKLEQHVESLQEDFKKHLNAMSV----KTVNSHLARLYNPSKEPALIFYRHGVALL 460
C CKKL E + K + + + T+ L Y S P + R+G
Sbjct: 176 CGHCKKLAPEYEKAAQKLKAQGSKVKLGKVDATIEKDLGTKYGVSGYPTMKIIRNGRRFD 235
Query: 461 YSGEADENEIYGFFEKNQTPAVKEL 535
Y+G + I + PA K+L
Sbjct: 236 YNGPREAAGIIKYMTDQSKPAAKKL 260
>U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform b protein.
Length = 437
Score = 31.1 bits (67), Expect = 0.76
Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 4/87 (4%)
Frame = +2
Query: 293 CETCKKLEQHVESLQEDFKKHLNAMSV----KTVNSHLARLYNPSKEPALIFYRHGVALL 460
C CK L K+ + + + TV+ ++ + P L +R+G
Sbjct: 52 CGHCKSLAPEYAKAATQLKEEGSDIKLGKLDATVHGEVSSKFEVRGYPTLKLFRNGKPQE 111
Query: 461 YSGEADENEIYGFFEKNQTPAVKELTD 541
Y+G D + I + +K P K L D
Sbjct: 112 YNGGRDHDSIIAWLKKKTGPVAKPLAD 138
>U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform c protein.
Length = 371
Score = 31.1 bits (67), Expect = 0.76
Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 4/87 (4%)
Frame = +2
Query: 293 CETCKKLEQHVESLQEDFKKHLNAMSV----KTVNSHLARLYNPSKEPALIFYRHGVALL 460
C CK L K+ + + + TV+ ++ + P L +R+G
Sbjct: 52 CGHCKSLAPEYAKAATQLKEEGSDIKLGKLDATVHGEVSSKFEVRGYPTLKLFRNGKPQE 111
Query: 461 YSGEADENEIYGFFEKNQTPAVKELTD 541
Y+G D + I + +K P K L D
Sbjct: 112 YNGGRDHDSIIAWLKKKTGPVAKPLAD 138
>U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform a protein.
Length = 493
Score = 31.1 bits (67), Expect = 0.76
Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 4/87 (4%)
Frame = +2
Query: 293 CETCKKLEQHVESLQEDFKKHLNAMSV----KTVNSHLARLYNPSKEPALIFYRHGVALL 460
C CK L K+ + + + TV+ ++ + P L +R+G
Sbjct: 52 CGHCKSLAPEYAKAATQLKEEGSDIKLGKLDATVHGEVSSKFEVRGYPTLKLFRNGKPQE 111
Query: 461 YSGEADENEIYGFFEKNQTPAVKELTD 541
Y+G D + I + +K P K L D
Sbjct: 112 YNGGRDHDSIIAWLKKKTGPVAKPLAD 138
>AF250045-1|AAG17620.1| 246|Caenorhabditis elegans thioredoxin-like
protein DPY-11 protein.
Length = 246
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = +2
Query: 293 CETCKKLEQHVESL---QEDFKKHLNAMSVKTVNSHLARLYNPSKEPALIFYRHGVALLY 463
C CK L++ + +D + + V TVN L+ + + P + + GV Y
Sbjct: 51 CPACKDLQKAWNAFADWSDDLGIKVGEVDV-TVNPGLSGRFLVTALPTIYHVKDGVFRQY 109
Query: 464 SGEADENEIYGFFEKNQTPAVKELTD 541
SG D+N+ F E + + + D
Sbjct: 110 SGARDKNDFISFVEDKKYRVIDPVPD 135
>AF125955-2|AAD14719.1| 246|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 11 protein.
Length = 246
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = +2
Query: 293 CETCKKLEQHVESL---QEDFKKHLNAMSVKTVNSHLARLYNPSKEPALIFYRHGVALLY 463
C CK L++ + +D + + V TVN L+ + + P + + GV Y
Sbjct: 51 CPACKDLQKAWNAFADWSDDLGIKVGEVDV-TVNPGLSGRFLVTALPTIYHVKDGVFRQY 109
Query: 464 SGEADENEIYGFFEKNQTPAVKELTD 541
SG D+N+ F E + + + D
Sbjct: 110 SGARDKNDFISFVEDKKYRVIDPVPD 135
>U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily
assigned gene nameprotein 320 protein.
Length = 440
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 524 VKELTDKIFEHLTQAATGATTGDWFVMFYGAACVECQRLHAVWESVGATLK 676
V ELTD FE L + W V F+ C C+ L W++ + LK
Sbjct: 166 VVELTDANFEDLVLNSKDI----WLVEFFAPWCGHCKSLEPQWKAAASELK 212
>AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical
protein Y47H9C.5b protein.
Length = 318
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 488 IYGFFEKNQTPAVKELTDKIFEHLTQAATGATTGDWFVMFYGAACVECQRL 640
I F + + P+V E++ + FE L T W V F+ C CQ+L
Sbjct: 69 ILEFLDNSLNPSVMEMSPEQFEELVMNRKDEET--WLVDFFAPWCGPCQQL 117
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 488 IYGFFEKNQTPAVKELTDKIFEHLTQAATGATTGDWFVMFYGAACVECQRL 640
I F + + P+V E++ + FE L T W V F+ C CQ+L
Sbjct: 539 ILEFLDNSLNPSVMEMSPEQFEELVMNRKDEET--WLVDFFAPWCGPCQQL 587
Score = 27.5 bits (58), Expect = 9.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +2
Query: 593 WFVMFYGAACVECQRLHAVW 652
WF+ FY C C +L W
Sbjct: 137 WFINFYSTYCSHCHQLAPTW 156
>AC024214-15|AAM97983.1| 544|Caenorhabditis elegans Hypothetical
protein Y77E11A.12a protein.
Length = 544
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -2
Query: 352 FLKVFL*TFYMLFQFLTCLTILLSE*DNKLFFFSYKFQKF 233
FL V+ + +LF F TC+ +LFF +Y F+KF
Sbjct: 225 FLTVYWTCWTLLFAFGTCIGWTFLAIGIRLFFTTYLFEKF 264
>AC024214-14|AAU87808.1| 644|Caenorhabditis elegans Hypothetical
protein Y77E11A.12b protein.
Length = 644
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -2
Query: 352 FLKVFL*TFYMLFQFLTCLTILLSE*DNKLFFFSYKFQKF 233
FL V+ + +LF F TC+ +LFF +Y F+KF
Sbjct: 325 FLTVYWTCWTLLFAFGTCIGWTFLAIGIRLFFTTYLFEKF 364
>AF000191-1|AAB52884.1| 533|Caenorhabditis elegans Hypothetical
protein T23C6.3 protein.
Length = 533
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 278 FTKQNCE---TCKKLEQHVESLQEDFKKHLNAMSVKTVNSHLARLYNPSKE 421
+TK+N + TC+KL + ++ FK+ MSV+TV + + +E
Sbjct: 82 YTKRNRDEIVTCQKLFSEITAIMRRFKQLTEEMSVETVEVKIKSMIKDCQE 132
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = -2
Query: 670 CCSNTFPNSM*PLAFNTSCPIKHDKPISCC--CTSSCLCQ 557
C +N PN F CP+K ++C C C C+
Sbjct: 163 CGTNEEPNQCHNACFEKKCPVKPQPLVNCMEKCDIGCSCK 202
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = -2
Query: 670 CCSNTFPNSM*PLAFNTSCPIKHDKPISCC--CTSSCLCQ 557
C +N PN F CP+K ++C C C C+
Sbjct: 163 CGTNEEPNQCHNACFEKKCPVKPQPLVNCMEKCDIGCSCK 202
>Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical
protein Y69H2.3a protein.
Length = 537
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = -2
Query: 670 CCSNTFPNSM*PLAFNTSCPIKHDKPISCC--CTSSCLCQ 557
C +N PN F CP+K ++C C C C+
Sbjct: 163 CGTNEEPNQCHNACFEKKCPVKPQPLVNCMEKCDIGCSCK 202
>AF043704-1|AAK21475.1| 487|Caenorhabditis elegans Hypothetical
protein W01B11.3 protein.
Length = 487
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 296 ETCKKLEQHVESLQEDFKKHLNAMSVKTVNSHLARL---YNPSKEPALI 433
E + + H+E L + K+ +NAM++ +S LAR +NP K +I
Sbjct: 113 ELMRGVRAHIEDLLAEHKEEMNAMNLAVAHS-LARYKVKFNPEKIDTMI 160
>Z73905-4|CAI91175.1| 536|Caenorhabditis elegans Hypothetical
protein C32C4.7 protein.
Length = 536
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 391 MTIYSLNAHSI*VFLKVFL*TF-YMLFQFLTCLTILL 284
M+ +SLN I +FL VFL Y LF FL L LL
Sbjct: 484 MSFFSLNMIDIFLFLGVFLAILVYFLFTFLRLLLNLL 520
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,353,255
Number of Sequences: 27780
Number of extensions: 249187
Number of successful extensions: 810
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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