Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16m24
         (611 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132862-28|CAB60545.2|  610|Caenorhabditis elegans Hypothetical...    31   0.49 
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr...    31   0.86 
U41107-4|AAK73878.1|  876|Caenorhabditis elegans Hypothetical pr...    30   1.5  
U41107-3|AAK73879.1|  925|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AF016452-19|AAB66008.1|  344|Caenorhabditis elegans Acyltransfer...    29   2.6  
AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical ...    27   8.0  
AL117195-21|CAB55033.2|  313|Caenorhabditis elegans Hypothetical...    27   8.0  

>AL132862-28|CAB60545.2|  610|Caenorhabditis elegans Hypothetical
           protein Y73F8A.19 protein.
          Length = 610

 Score = 31.5 bits (68), Expect = 0.49
 Identities = 19/71 (26%), Positives = 39/71 (54%)
 Frame = -1

Query: 437 VCSFLLIFPNSDEVGFNSTTLENKIAWRNKYFPILICTFSSVNSNRLLHFHTKLY*YKSY 258
           VCS  +IFP  D+ G+ ++ +E     R++  PI++   +   S +L+  ++ +Y  + Y
Sbjct: 136 VCSGPVIFPLVDQSGYRTSEVEIWSQLRDRPQPIVMQLEAKNLSTKLVSSNSNVY-IEVY 194

Query: 257 NTRPDKSRVLH 225
               D+ R+L+
Sbjct: 195 KVEDDQKRMLY 205


>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical
           protein C03D6.4 protein.
          Length = 1390

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = -1

Query: 428 FLLIFPNSDEVGFNSTTLENKIAWRNKYFPILICTFSSVNSNRLLHFHTK 279
           F L    SD    N   + N++A  ++    L  TF +VNSN+L  FHTK
Sbjct: 24  FRLFSSKSDGYSQNEINIRNRVATSSQ----LGVTFVTVNSNQLSCFHTK 69


>U41107-4|AAK73878.1|  876|Caenorhabditis elegans Hypothetical
           protein F55C12.5a protein.
          Length = 876

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = +1

Query: 358 QAILFSKVVELKPTSSLFGNISRKLHTDEIPVKEIEIPVQWG---RLSAKLWGTDQRRPI 528
           Q+ LF K  +L+  + L  ++S       + V+E+E P+        S +LW   +RRPI
Sbjct: 757 QSSLFQKAAKLQAVARLIEDVSTTPLMLNVEVEEVEGPMTCNIPPPPSDRLWYAFRRRPI 816

Query: 529 LAL 537
           L L
Sbjct: 817 LKL 819


>U41107-3|AAK73879.1|  925|Caenorhabditis elegans Hypothetical
           protein F55C12.5b protein.
          Length = 925

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = +1

Query: 358 QAILFSKVVELKPTSSLFGNISRKLHTDEIPVKEIEIPVQWG---RLSAKLWGTDQRRPI 528
           Q+ LF K  +L+  + L  ++S       + V+E+E P+        S +LW   +RRPI
Sbjct: 806 QSSLFQKAAKLQAVARLIEDVSTTPLMLNVEVEEVEGPMTCNIPPPPSDRLWYAFRRRPI 865

Query: 529 LAL 537
           L L
Sbjct: 866 LKL 868


>AF016452-19|AAB66008.1|  344|Caenorhabditis elegans
           Acyltransferase-like protein 8 protein.
          Length = 344

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
 Frame = +1

Query: 301 RFELTLLKVQIRMGKYLLRQAILFSKVVELKPTSSLFGNISRKLHTDEIPVKEIEIPVQW 480
           +F + L+K +  + KY+    I +S  +       L GN   K+H D    K  EIP   
Sbjct: 203 KFLMELMKKENYI-KYVYDLTIAYSGTIVDTEAKLLAGNFPDKVHLDVKKYKLDEIPTGE 261

Query: 481 G--RLSAKLWGTDQRR 522
           G  +    LW T ++R
Sbjct: 262 GCEKWLTDLWATKEKR 277


>AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical
            protein Y80D3A.2 protein.
          Length = 1467

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 334  RMGKYLLRQAILFSKVVELKPTSSLFGNISRKL 432
            R+G Y+L ++ +F   +EL P   +F    RKL
Sbjct: 1300 RLGLYVLGRSKVFMDCLELTPAMRIFAKYPRKL 1332


>AL117195-21|CAB55033.2|  313|Caenorhabditis elegans Hypothetical
           protein Y57A10A.28 protein.
          Length = 313

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = -2

Query: 562 CLHYLAIHVKLISVCVGLYPIILPIGDPIALVF 464
           C+    I+ KL S+C+ ++ +++PI + +  VF
Sbjct: 224 CVVGFFIYFKLASLCLSVHDVLMPIENVLCAVF 256


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,403,300
Number of Sequences: 27780
Number of extensions: 271700
Number of successful extensions: 605
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)