Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16m23
         (635 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001713-1|AAN71468.1|  552|Drosophila melanogaster RE67722p pro...    34   0.14 
AE014134-2496|AAF53395.3|  678|Drosophila melanogaster CG4220-PA...    34   0.14 
AE014134-2495|AAS64707.1|  552|Drosophila melanogaster CG4220-PC...    34   0.14 
AE014134-2494|AAO41196.1|  818|Drosophila melanogaster CG4220-PB...    34   0.14 
AY115567-1|AAM48283.1|  553|Drosophila melanogaster elbow protein.     31   1.3  
L14009-1|AAA16473.1|  537|Drosophila melanogaster zinc finger pr...    29   5.3  
AY070550-1|AAL48021.1|  537|Drosophila melanogaster LD28078p pro...    29   5.3  
AE014134-2500|AAF53399.1|  537|Drosophila melanogaster CG4491-PA...    29   5.3  
AY795933-1|AAY27518.1|  910|Drosophila melanogaster notch protein.     29   7.0  

>BT001713-1|AAN71468.1|  552|Drosophila melanogaster RE67722p
           protein.
          Length = 552

 Score = 34.3 bits (75), Expect = 0.14
 Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
 Frame = +3

Query: 153 SPLALLAATCSRLGAANMGPEQ-----QQSDKEQQHH 248
           SPLALLA TCS +GA    P+      ++S K+ QHH
Sbjct: 29  SPLALLAQTCSAIGADTTNPKLLAANIEKSTKQLQHH 65


>AE014134-2496|AAF53395.3|  678|Drosophila melanogaster CG4220-PA,
           isoform A protein.
          Length = 678

 Score = 34.3 bits (75), Expect = 0.14
 Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
 Frame = +3

Query: 153 SPLALLAATCSRLGAANMGPEQ-----QQSDKEQQHH 248
           SPLALLA TCS +GA    P+      ++S K+ QHH
Sbjct: 135 SPLALLAQTCSAIGADTTNPKLLAANIEKSTKQLQHH 171


>AE014134-2495|AAS64707.1|  552|Drosophila melanogaster CG4220-PC,
           isoform C protein.
          Length = 552

 Score = 34.3 bits (75), Expect = 0.14
 Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
 Frame = +3

Query: 153 SPLALLAATCSRLGAANMGPEQ-----QQSDKEQQHH 248
           SPLALLA TCS +GA    P+      ++S K+ QHH
Sbjct: 29  SPLALLAQTCSAIGADTTNPKLLAANIEKSTKQLQHH 65


>AE014134-2494|AAO41196.1|  818|Drosophila melanogaster CG4220-PB,
           isoform B protein.
          Length = 818

 Score = 34.3 bits (75), Expect = 0.14
 Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
 Frame = +3

Query: 153 SPLALLAATCSRLGAANMGPEQ-----QQSDKEQQHH 248
           SPLALLA TCS +GA    P+      ++S K+ QHH
Sbjct: 135 SPLALLAQTCSAIGADTTNPKLLAANIEKSTKQLQHH 171


>AY115567-1|AAM48283.1|  553|Drosophila melanogaster elbow protein.
          Length = 553

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 5/36 (13%)
 Frame = +3

Query: 153 SPLALLAATCSRLGAANMGPEQ-----QQSDKEQQH 245
           SPLALLA TCS +GA    P+      ++S K+ QH
Sbjct: 30  SPLALLAQTCSAIGADTTNPKLLAANIEKSTKQLQH 65


>L14009-1|AAA16473.1|  537|Drosophila melanogaster zinc finger
           protein protein.
          Length = 537

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +3

Query: 150 QSPLALLAATCSRLGA 197
           +SPLALLA TCS++GA
Sbjct: 35  KSPLALLAQTCSQIGA 50


>AY070550-1|AAL48021.1|  537|Drosophila melanogaster LD28078p
           protein.
          Length = 537

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +3

Query: 150 QSPLALLAATCSRLGA 197
           +SPLALLA TCS++GA
Sbjct: 35  KSPLALLAQTCSQIGA 50


>AE014134-2500|AAF53399.1|  537|Drosophila melanogaster CG4491-PA
           protein.
          Length = 537

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +3

Query: 150 QSPLALLAATCSRLGA 197
           +SPLALLA TCS++GA
Sbjct: 35  KSPLALLAQTCSQIGA 50


>AY795933-1|AAY27518.1|  910|Drosophila melanogaster notch protein.
          Length = 910

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +3

Query: 114 PLDLSVMEGSGSQSPLALLAATCSRLGAA--NMGPEQQQSDKEQQHH 248
           P+ L ++  +GS   + L     S+  A    + P+QQQ  ++QQ H
Sbjct: 711 PVSLGIISPTGSDMGIMLAPPQSSKNSAIMQTISPQQQQQQQQQQQH 757


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,634,284
Number of Sequences: 53049
Number of extensions: 259566
Number of successful extensions: 1642
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1620
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)