Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16m22
         (707 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1265 - 27435096-27437675                                         28   8.4  
10_08_0249 + 16172811-16172987,16174048-16174299,16174426-161745...    28   8.4  
04_04_1517 + 34125549-34125634,34125725-34125789,34125878-341260...    28   8.4  

>12_02_1265 - 27435096-27437675
          Length = 859

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +3

Query: 333 DFQKNVWMKLQEIPFG-STYTYSDITKALGRPTTHARAVDLIVESIVKNG 479
           +F  +++ ++QE+     T+TYS +   LG+    A A  L  E +V+NG
Sbjct: 453 EFAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCE-MVENG 501


>10_08_0249 +
           16172811-16172987,16174048-16174299,16174426-16174505,
           16174616-16174701,16174799-16174904,16174987-16175143,
           16175220-16175315,16175797-16175845,16175946-16176205,
           16176327-16176499,16176692-16176812,16176923-16176975,
           16177088-16177217,16177371-16177516,16177887-16178075,
           16178317-16178549,16178784-16178932,16179042-16179104
          Length = 839

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 10/43 (23%), Positives = 21/43 (48%)
 Frame = +3

Query: 339 QKNVWMKLQEIPFGSTYTYSDITKALGRPTTHARAVDLIVESI 467
           +K +W+     P+ ST  +   +  L    T  +A +++VE +
Sbjct: 539 EKELWVPFDNTPYCSTTAFDGASSVLQEVYTSLKAAEIVVEQL 581


>04_04_1517 +
           34125549-34125634,34125725-34125789,34125878-34126085,
           34126819-34126911,34127302-34127389,34127788-34128060
          Length = 270

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +3

Query: 342 KNVWMKLQEIPFGSTYTYSDITKALGRPTTHARAVDLIVESIVKNGLLN 488
           K+V     E+  G  +T SD+ K L        AVD ++      GLLN
Sbjct: 107 KDVEKAAVELLAGRAFTVSDLRKKLRAKKFPDNAVDSVIADFKSRGLLN 155


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,252,267
Number of Sequences: 37544
Number of extensions: 274519
Number of successful extensions: 523
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)