Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16m22
         (707 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457282-1|CAG33563.1|  212|Homo sapiens RAB17 protein.                34   0.57 
BC050426-1|AAH50426.1|  212|Homo sapiens RAB17, member RAS oncog...    34   0.57 
BC009827-1|AAH09827.1|   85|Homo sapiens RAB17 protein protein.        34   0.57 
BC007907-1|AAH07907.1|   85|Homo sapiens RAB17 protein protein.        34   0.57 
BC000929-1|AAH00929.1|  110|Homo sapiens hypothetical protein FL...    34   0.57 
AK022600-1|BAB14121.1|  212|Homo sapiens protein ( Homo sapiens ...    34   0.57 
AC104667-3|AAY24047.1|  212|Homo sapiens unknown protein.              34   0.57 
CR533454-1|CAG38485.1|  212|Homo sapiens RAB17 protein.                31   4.0  

>CR457282-1|CAG33563.1|  212|Homo sapiens RAB17 protein.
          Length = 212

 Score = 33.9 bits (74), Expect = 0.57
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 156 VCFEDTKQFENKFKVLAKELSCRFVHEENKILNTLKEELL 275
           V F++ K+F +  K+L  E S +  H+ +++ NT+ +ELL
Sbjct: 142 VTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELL 181


>BC050426-1|AAH50426.1|  212|Homo sapiens RAB17, member RAS oncogene
           family protein.
          Length = 212

 Score = 33.9 bits (74), Expect = 0.57
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 156 VCFEDTKQFENKFKVLAKELSCRFVHEENKILNTLKEELL 275
           V F++ K+F +  K+L  E S +  H+ +++ NT+ +ELL
Sbjct: 142 VTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELL 181


>BC009827-1|AAH09827.1|   85|Homo sapiens RAB17 protein protein.
          Length = 85

 Score = 33.9 bits (74), Expect = 0.57
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 156 VCFEDTKQFENKFKVLAKELSCRFVHEENKILNTLKEELL 275
           V F++ K+F +  K+L  E S +  H+ +++ NT+ +ELL
Sbjct: 15  VTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELL 54


>BC007907-1|AAH07907.1|   85|Homo sapiens RAB17 protein protein.
          Length = 85

 Score = 33.9 bits (74), Expect = 0.57
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 156 VCFEDTKQFENKFKVLAKELSCRFVHEENKILNTLKEELL 275
           V F++ K+F +  K+L  E S +  H+ +++ NT+ +ELL
Sbjct: 15  VTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELL 54


>BC000929-1|AAH00929.1|  110|Homo sapiens hypothetical protein
           FLJ12538 similar to ras-related protein RAB17 protein.
          Length = 110

 Score = 33.9 bits (74), Expect = 0.57
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 156 VCFEDTKQFENKFKVLAKELSCRFVHEENKILNTLKEELL 275
           V F++ K+F +  K+L  E S +  H+ +++ NT+ +ELL
Sbjct: 40  VTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELL 79


>AK022600-1|BAB14121.1|  212|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12538 fis, clone NT2RM4000356, moderately
           similar to RAS-RELATED PROTEIN RAB-17. ).
          Length = 212

 Score = 33.9 bits (74), Expect = 0.57
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 156 VCFEDTKQFENKFKVLAKELSCRFVHEENKILNTLKEELL 275
           V F++ K+F +  K+L  E S +  H+ +++ NT+ +ELL
Sbjct: 142 VTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELL 181


>AC104667-3|AAY24047.1|  212|Homo sapiens unknown protein.
          Length = 212

 Score = 33.9 bits (74), Expect = 0.57
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 156 VCFEDTKQFENKFKVLAKELSCRFVHEENKILNTLKEELL 275
           V F++ K+F +  K+L  E S +  H+ +++ NT+ +ELL
Sbjct: 142 VTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELL 181


>CR533454-1|CAG38485.1|  212|Homo sapiens RAB17 protein.
          Length = 212

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = +3

Query: 156 VCFEDTKQFENKFKVLAKELSCRFVHEENKILNTLKEELL 275
           V F++ K+F +  K+   E S +  H+ +++ NT+ +ELL
Sbjct: 142 VTFQEGKEFADSQKLPFMETSAKLNHQVSEVFNTVAQELL 181


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,530,027
Number of Sequences: 237096
Number of extensions: 1631986
Number of successful extensions: 7148
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7148
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)