Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16m22
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-21|CAJ76952.1| 133|Caenorhabditis elegans Hypothetical... 34 0.11
AL132865-20|CAB60594.2| 175|Caenorhabditis elegans Hypothetical... 34 0.11
U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated p... 32 0.46
U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated p... 32 0.46
M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related... 32 0.46
AC024808-3|AAK29925.1| 183|Caenorhabditis elegans Hypothetical ... 29 3.3
Z30662-11|CAE17937.1| 358|Caenorhabditis elegans Hypothetical p... 28 7.5
Z30317-8|CAE17925.1| 358|Caenorhabditis elegans Hypothetical pr... 28 7.5
U41025-2|AAM51507.2| 356|Caenorhabditis elegans Hypothetical pr... 27 9.9
U41025-1|AAM51508.1| 407|Caenorhabditis elegans Hypothetical pr... 27 9.9
>AL132865-21|CAJ76952.1| 133|Caenorhabditis elegans Hypothetical
protein Y62E10A.5b protein.
Length = 133
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 336 FQKNVWMKLQEIPFGSTYTYSDITKALGRPTTHARAVDLIVESIVKNGL 482
F V+ +Q+IP G T +YSDI + +G P+ AV + + +N L
Sbjct: 47 FGMQVYSAIQKIPKGETRSYSDIAREIGNPS----AVRAVASACARNNL 91
>AL132865-20|CAB60594.2| 175|Caenorhabditis elegans Hypothetical
protein Y62E10A.5a protein.
Length = 175
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 336 FQKNVWMKLQEIPFGSTYTYSDITKALGRPTTHARAVDLIVESIVKNGL 482
F V+ +Q+IP G T +YSDI + +G P+ AV + + +N L
Sbjct: 89 FGMQVYSAIQKIPKGETRSYSDIAREIGNPS----AVRAVASACARNNL 133
>U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated
protein 104, isoforma protein.
Length = 1584
Score = 31.9 bits (69), Expect = 0.46
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 210 ELSCRFVHEENKILNTLKEELLCYFNG 290
EL C F++E+ + T+K CY NG
Sbjct: 511 ELHCEFINEDGNVTLTMKPNASCYING 537
>U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated
protein 104, isoformb protein.
Length = 1628
Score = 31.9 bits (69), Expect = 0.46
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 210 ELSCRFVHEENKILNTLKEELLCYFNG 290
EL C F++E+ + T+K CY NG
Sbjct: 511 ELHCEFINEDGNVTLTMKPNASCYING 537
>M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related
protein protein.
Length = 1584
Score = 31.9 bits (69), Expect = 0.46
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 210 ELSCRFVHEENKILNTLKEELLCYFNG 290
EL C F++E+ + T+K CY NG
Sbjct: 511 ELHCEFINEDGNVTLTMKPNASCYING 537
>AC024808-3|AAK29925.1| 183|Caenorhabditis elegans Hypothetical
protein Y53G8AM.6 protein.
Length = 183
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 201 LAKELSCRFVHEENKILNTLKEELLCYFN 287
L K + CR+ EEN +N + L C+F+
Sbjct: 123 LQKTIGCRYKCEENDAINCKNDTLKCFFS 151
>Z30662-11|CAE17937.1| 358|Caenorhabditis elegans Hypothetical
protein T16G12.9 protein.
Length = 358
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 234 EENKILNTLKEELLCYFNGNLKKFSVPLKTLGSDFQKNVWMKLQEIPF 377
E NKI + ++ F+G L+K +V +D+ K + ++ EIPF
Sbjct: 114 ERNKIWIKITADINKEFSGRLEKITVGGTKKLADYWKGRFPRISEIPF 161
>Z30317-8|CAE17925.1| 358|Caenorhabditis elegans Hypothetical
protein T16G12.9 protein.
Length = 358
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 234 EENKILNTLKEELLCYFNGNLKKFSVPLKTLGSDFQKNVWMKLQEIPF 377
E NKI + ++ F+G L+K +V +D+ K + ++ EIPF
Sbjct: 114 ERNKIWIKITADINKEFSGRLEKITVGGTKKLADYWKGRFPRISEIPF 161
>U41025-2|AAM51507.2| 356|Caenorhabditis elegans Hypothetical
protein C01C4.3a protein.
Length = 356
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 186 NKFKVLAKELSC-RFVHEENKILNTLKEELLCYFNGN 293
N KV A LS F+H+EN + LK E + F+ N
Sbjct: 114 NTKKVFAAVLSAIEFMHDENLVHRNLKAENILIFDAN 150
>U41025-1|AAM51508.1| 407|Caenorhabditis elegans Hypothetical
protein C01C4.3b protein.
Length = 407
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 186 NKFKVLAKELSC-RFVHEENKILNTLKEELLCYFNGN 293
N KV A LS F+H+EN + LK E + F+ N
Sbjct: 227 NTKKVFAAVLSAIEFMHDENLVHRNLKAENILIFDAN 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,505,152
Number of Sequences: 27780
Number of extensions: 287395
Number of successful extensions: 711
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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