Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16m20
(408 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018621-1|AAH18621.1| 103|Homo sapiens LSM7 homolog, U6 small ... 175 5e-44
AF182293-1|AAD56231.1| 103|Homo sapiens U6 snRNA-associated Sm-... 175 5e-44
AC005258-2|AAG45442.1| 103|Homo sapiens U6 snRNA-associated Sm-... 175 5e-44
AC005258-1|AAC25622.1| 145|Homo sapiens R30783_1 protein. 128 9e-30
X85373-1|CAA59689.1| 76|Homo sapiens Sm protein G protein. 53 4e-07
CR456918-1|CAG33199.1| 76|Homo sapiens SNRPG protein. 53 4e-07
BC106055-1|AAI06056.1| 76|Homo sapiens small nuclear ribonucle... 53 4e-07
BC071880-1|AAH71880.1| 76|Homo sapiens small nuclear ribonucle... 53 4e-07
BC070166-1|AAH70166.1| 76|Homo sapiens small nuclear ribonucle... 53 4e-07
BC066302-1|AAH66302.1| 76|Homo sapiens small nuclear ribonucle... 53 4e-07
BC022432-1|AAH22432.1| 76|Homo sapiens small nuclear ribonucle... 53 4e-07
BC000070-1|AAH00070.1| 76|Homo sapiens small nuclear ribonucle... 53 4e-07
AC079338-2|AAX81996.1| 76|Homo sapiens unknown protein. 53 4e-07
BC035103-1|AAH35103.1| 64|Homo sapiens SNRPG protein protein. 47 2e-05
BC022440-1|AAH22440.1| 96|Homo sapiens LSM8 homolog, U6 small ... 42 0.001
BC002742-1|AAH02742.1| 96|Homo sapiens LSM8 homolog, U6 small ... 42 0.001
AF182294-1|AAD56232.1| 96|Homo sapiens U6 snRNA-associated Sm-... 42 0.001
AC006389-1|AAD15542.1| 96|Homo sapiens WUGSC:H_RG437B22.1 prot... 42 0.001
BC045532-1|AAH45532.1| 67|Homo sapiens LSM8 protein protein. 38 0.010
CR457185-1|CAG33466.1| 102|Homo sapiens LSM3 protein. 36 0.053
BC007055-1|AAH07055.1| 102|Homo sapiens LSM3 homolog, U6 small ... 36 0.053
AJ238095-1|CAB45866.1| 102|Homo sapiens Lsm3 protein protein. 36 0.053
AF182418-1|AAG14954.1| 102|Homo sapiens MDS017 protein. 36 0.053
AF182289-1|AAD56227.1| 102|Homo sapiens U6 snRNA-associated Sm-... 36 0.053
BC005938-1|AAH05938.1| 91|Homo sapiens LSM5 homolog, U6 small ... 33 0.49
AJ238097-1|CAB45868.1| 91|Homo sapiens Lsm5 protein protein. 33 0.49
AF182291-1|AAD56229.1| 91|Homo sapiens U6 snRNA-associated Sm-... 33 0.49
X90568-1|CAA62188.1|26926|Homo sapiens titin protein. 31 1.1
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein. 31 1.1
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein. 31 1.1
S75989-1|AAB33570.1| 632|Homo sapiens gamma-aminobutyric acid t... 29 6.0
>BC018621-1|AAH18621.1| 103|Homo sapiens LSM7 homolog, U6 small
nuclear RNA associated (S. cerevisiae) protein.
Length = 103
Score = 175 bits (426), Expect = 5e-44
Identities = 79/99 (79%), Positives = 91/99 (91%)
Frame = +3
Query: 54 NKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPY 233
+KEK++KESILDLSKY++K+IRVKF GGREA+GILKG+DPLLNLVLD T E++RDPDD Y
Sbjct: 3 DKEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQY 62
Query: 234 KLLDDTRALGLVVCRGTSVVLICPMDGMEAIPNPFINQE 350
KL +DTR LGLVVCRGTSVVLICP DGMEAIPNPFI Q+
Sbjct: 63 KLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQ 101
>AF182293-1|AAD56231.1| 103|Homo sapiens U6 snRNA-associated
Sm-like protein LSm7 protein.
Length = 103
Score = 175 bits (426), Expect = 5e-44
Identities = 79/99 (79%), Positives = 91/99 (91%)
Frame = +3
Query: 54 NKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPY 233
+KEK++KESILDLSKY++K+IRVKF GGREA+GILKG+DPLLNLVLD T E++RDPDD Y
Sbjct: 3 DKEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQY 62
Query: 234 KLLDDTRALGLVVCRGTSVVLICPMDGMEAIPNPFINQE 350
KL +DTR LGLVVCRGTSVVLICP DGMEAIPNPFI Q+
Sbjct: 63 KLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQ 101
>AC005258-2|AAG45442.1| 103|Homo sapiens U6 snRNA-associated
Sm-like protein LSm7 protein.
Length = 103
Score = 175 bits (426), Expect = 5e-44
Identities = 79/99 (79%), Positives = 91/99 (91%)
Frame = +3
Query: 54 NKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPY 233
+KEK++KESILDLSKY++K+IRVKF GGREA+GILKG+DPLLNLVLD T E++RDPDD Y
Sbjct: 3 DKEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQY 62
Query: 234 KLLDDTRALGLVVCRGTSVVLICPMDGMEAIPNPFINQE 350
KL +DTR LGLVVCRGTSVVLICP DGMEAIPNPFI Q+
Sbjct: 63 KLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQ 101
>AC005258-1|AAC25622.1| 145|Homo sapiens R30783_1 protein.
Length = 145
Score = 128 bits (308), Expect = 9e-30
Identities = 57/72 (79%), Positives = 63/72 (87%)
Frame = +3
Query: 135 GREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLVVCRGTSVVLICPMDG 314
GR +GILKG+DPLLNLVLD T E++RDPDD YKL +DTR LGLVVCRGTSVVLICP DG
Sbjct: 72 GRPRSGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDG 131
Query: 315 MEAIPNPFINQE 350
MEAIPNPFI Q+
Sbjct: 132 MEAIPNPFIQQQ 143
>X85373-1|CAA59689.1| 76|Homo sapiens Sm protein G protein.
Length = 76
Score = 52.8 bits (121), Expect = 4e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +3
Query: 87 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 266
+L K+++K + +K GGR GIL+G+DP +NLV+D E +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATS--------GQQNNIGM 59
Query: 267 VVCRGTSVVLI 299
VV RG S++++
Sbjct: 60 VVIRGNSIIML 70
>CR456918-1|CAG33199.1| 76|Homo sapiens SNRPG protein.
Length = 76
Score = 52.8 bits (121), Expect = 4e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +3
Query: 87 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 266
+L K+++K + +K GGR GIL+G+DP +NLV+D E +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATS--------GQQNNIGM 59
Query: 267 VVCRGTSVVLI 299
VV RG S++++
Sbjct: 60 VVIRGNSIIML 70
>BC106055-1|AAI06056.1| 76|Homo sapiens small nuclear
ribonucleoprotein polypeptide G protein.
Length = 76
Score = 52.8 bits (121), Expect = 4e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +3
Query: 87 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 266
+L K+++K + +K GGR GIL+G+DP +NLV+D E +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATS--------GQQNNIGM 59
Query: 267 VVCRGTSVVLI 299
VV RG S++++
Sbjct: 60 VVIRGNSIIML 70
>BC071880-1|AAH71880.1| 76|Homo sapiens small nuclear
ribonucleoprotein polypeptide G protein.
Length = 76
Score = 52.8 bits (121), Expect = 4e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +3
Query: 87 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 266
+L K+++K + +K GGR GIL+G+DP +NLV+D E +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATS--------GQQNNIGM 59
Query: 267 VVCRGTSVVLI 299
VV RG S++++
Sbjct: 60 VVIRGNSIIML 70
>BC070166-1|AAH70166.1| 76|Homo sapiens small nuclear
ribonucleoprotein polypeptide G protein.
Length = 76
Score = 52.8 bits (121), Expect = 4e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +3
Query: 87 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 266
+L K+++K + +K GGR GIL+G+DP +NLV+D E +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATS--------GQQNNIGM 59
Query: 267 VVCRGTSVVLI 299
VV RG S++++
Sbjct: 60 VVIRGNSIIML 70
>BC066302-1|AAH66302.1| 76|Homo sapiens small nuclear
ribonucleoprotein polypeptide G protein.
Length = 76
Score = 52.8 bits (121), Expect = 4e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +3
Query: 87 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 266
+L K+++K + +K GGR GIL+G+DP +NLV+D E +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATS--------GQQNNIGM 59
Query: 267 VVCRGTSVVLI 299
VV RG S++++
Sbjct: 60 VVIRGNSIIML 70
>BC022432-1|AAH22432.1| 76|Homo sapiens small nuclear
ribonucleoprotein polypeptide G protein.
Length = 76
Score = 52.8 bits (121), Expect = 4e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +3
Query: 87 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 266
+L K+++K + +K GGR GIL+G+DP +NLV+D E +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATS--------GQQNNIGM 59
Query: 267 VVCRGTSVVLI 299
VV RG S++++
Sbjct: 60 VVIRGNSIIML 70
>BC000070-1|AAH00070.1| 76|Homo sapiens small nuclear
ribonucleoprotein polypeptide G protein.
Length = 76
Score = 52.8 bits (121), Expect = 4e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +3
Query: 87 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 266
+L K+++K + +K GGR GIL+G+DP +NLV+D E +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATS--------GQQNNIGM 59
Query: 267 VVCRGTSVVLI 299
VV RG S++++
Sbjct: 60 VVIRGNSIIML 70
>AC079338-2|AAX81996.1| 76|Homo sapiens unknown protein.
Length = 76
Score = 52.8 bits (121), Expect = 4e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +3
Query: 87 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 266
+L K+++K + +K GGR GIL+G+DP +NLV+D E +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATS--------GQQNNIGM 59
Query: 267 VVCRGTSVVLI 299
VV RG S++++
Sbjct: 60 VVIRGNSIIML 70
>BC035103-1|AAH35103.1| 64|Homo sapiens SNRPG protein protein.
Length = 64
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = +3
Query: 102 LEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLVVCRG 281
++K + +K GGR GIL+G+DP +NLV+D E +G+VV RG
Sbjct: 1 MDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATS--------GQQNNIGMVVIRG 52
Query: 282 TSVVLI 299
S++++
Sbjct: 53 NSIIML 58
>BC022440-1|AAH22440.1| 96|Homo sapiens LSM8 homolog, U6 small
nuclear RNA associated (S. cerevisiae) protein.
Length = 96
Score = 41.5 bits (93), Expect = 0.001
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +3
Query: 90 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 269
L Y+ +++ V + GR G LKG+D +NL+LD + E + + + LGL
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 270 VCRGTSVVLICPMD 311
+ RG +V +I +D
Sbjct: 61 IVRGDNVAVIGEID 74
>BC002742-1|AAH02742.1| 96|Homo sapiens LSM8 homolog, U6 small
nuclear RNA associated (S. cerevisiae) protein.
Length = 96
Score = 41.5 bits (93), Expect = 0.001
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +3
Query: 90 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 269
L Y+ +++ V + GR G LKG+D +NL+LD + E + + + LGL
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 270 VCRGTSVVLICPMD 311
+ RG +V +I +D
Sbjct: 61 IVRGDNVAVIGEID 74
>AF182294-1|AAD56232.1| 96|Homo sapiens U6 snRNA-associated
Sm-like protein LSm8 protein.
Length = 96
Score = 41.5 bits (93), Expect = 0.001
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +3
Query: 90 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 269
L Y+ +++ V + GR G LKG+D +NL+LD + E + + + LGL
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 270 VCRGTSVVLICPMD 311
+ RG +V +I +D
Sbjct: 61 IVRGDNVAVIGEID 74
>AC006389-1|AAD15542.1| 96|Homo sapiens WUGSC:H_RG437B22.1
protein.
Length = 96
Score = 41.5 bits (93), Expect = 0.001
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +3
Query: 90 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 269
L Y+ +++ V + GR G LKG+D +NL+LD + E + + + LGL
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 270 VCRGTSVVLICPMD 311
+ RG +V +I +D
Sbjct: 61 IVRGDNVAVIGEID 74
>BC045532-1|AAH45532.1| 67|Homo sapiens LSM8 protein protein.
Length = 67
Score = 38.3 bits (85), Expect = 0.010
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +3
Query: 90 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 269
L Y+ +++ V + GR G LKG+D +NL+LD + E + + + LGL
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 270 VCRGTSV 290
+ RG +V
Sbjct: 61 IVRGDNV 67
>CR457185-1|CAG33466.1| 102|Homo sapiens LSM3 protein.
Length = 102
Score = 35.9 bits (79), Expect = 0.053
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +3
Query: 75 ESILDLSKY-LEKSIRVKFAGGREAAGILKGYDPLLNLVL---DNTTEFLRDPDDPYKLL 242
E LDL + L++ I VK RE G L YD LN++L + T + ++ Y+ +
Sbjct: 15 EEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEI 74
Query: 243 --DDTRALGLVVCRGTSVVLICP 305
R + ++ RG VVL+ P
Sbjct: 75 YKSTKRNIPMLFVRGDGVVLVAP 97
>BC007055-1|AAH07055.1| 102|Homo sapiens LSM3 homolog, U6 small
nuclear RNA associated (S. cerevisiae) protein.
Length = 102
Score = 35.9 bits (79), Expect = 0.053
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +3
Query: 75 ESILDLSKY-LEKSIRVKFAGGREAAGILKGYDPLLNLVL---DNTTEFLRDPDDPYKLL 242
E LDL + L++ I VK RE G L YD LN++L + T + ++ Y+ +
Sbjct: 15 EEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEI 74
Query: 243 --DDTRALGLVVCRGTSVVLICP 305
R + ++ RG VVL+ P
Sbjct: 75 YKSTKRNIPMLFVRGDGVVLVAP 97
>AJ238095-1|CAB45866.1| 102|Homo sapiens Lsm3 protein protein.
Length = 102
Score = 35.9 bits (79), Expect = 0.053
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +3
Query: 75 ESILDLSKY-LEKSIRVKFAGGREAAGILKGYDPLLNLVL---DNTTEFLRDPDDPYKLL 242
E LDL + L++ I VK RE G L YD LN++L + T + ++ Y+ +
Sbjct: 15 EEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEI 74
Query: 243 --DDTRALGLVVCRGTSVVLICP 305
R + ++ RG VVL+ P
Sbjct: 75 YKSTKRNIPMLFVRGDGVVLVAP 97
>AF182418-1|AAG14954.1| 102|Homo sapiens MDS017 protein.
Length = 102
Score = 35.9 bits (79), Expect = 0.053
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +3
Query: 75 ESILDLSKY-LEKSIRVKFAGGREAAGILKGYDPLLNLVL---DNTTEFLRDPDDPYKLL 242
E LDL + L++ I VK RE G L YD LN++L + T + ++ Y+ +
Sbjct: 15 EEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEI 74
Query: 243 --DDTRALGLVVCRGTSVVLICP 305
R + ++ RG VVL+ P
Sbjct: 75 YKSTKRNIPMLFVRGDGVVLVAP 97
>AF182289-1|AAD56227.1| 102|Homo sapiens U6 snRNA-associated
Sm-like protein LSm3 protein.
Length = 102
Score = 35.9 bits (79), Expect = 0.053
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +3
Query: 75 ESILDLSKY-LEKSIRVKFAGGREAAGILKGYDPLLNLVL---DNTTEFLRDPDDPYKLL 242
E LDL + L++ I VK RE G L YD LN++L + T + ++ Y+ +
Sbjct: 15 EEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEI 74
Query: 243 --DDTRALGLVVCRGTSVVLICP 305
R + ++ RG VVL+ P
Sbjct: 75 YKSTKRNIPMLFVRGDGVVLVAP 97
>BC005938-1|AAH05938.1| 91|Homo sapiens LSM5 homolog, U6 small
nuclear RNA associated (S. cerevisiae) protein.
Length = 91
Score = 32.7 bits (71), Expect = 0.49
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 90 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPD 224
+ K + I + +E G L G+D +N+VL++ TEF P+
Sbjct: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPE 62
>AJ238097-1|CAB45868.1| 91|Homo sapiens Lsm5 protein protein.
Length = 91
Score = 32.7 bits (71), Expect = 0.49
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 90 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPD 224
+ K + I + +E G L G+D +N+VL++ TEF P+
Sbjct: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPE 62
>AF182291-1|AAD56229.1| 91|Homo sapiens U6 snRNA-associated
Sm-like protein LSm5 protein.
Length = 91
Score = 32.7 bits (71), Expect = 0.49
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 90 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPD 224
+ K + I + +E G L G+D +N+VL++ TEF P+
Sbjct: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPE 62
>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
Length = 26926
Score = 31.5 bits (68), Expect = 1.1
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +3
Query: 33 GSQVTGDNKEKRRKESILDLSKYLEKSIRVKFAGGRE--AAGILKGYDPLLNLVLDNTTE 206
GS+VTG + EK+ + SI L + + GRE A G+++G D + +N+
Sbjct: 21288 GSEVTGFHVEKKERNSI------LWQKVNTSPISGREYRATGLVEGLDYQFRVYAENSAG 21341
Query: 207 FLRDPDDPYK 236
L P DP K
Sbjct: 21342 -LSSPSDPSK 21350
>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
Length = 30000
Score = 31.5 bits (68), Expect = 1.1
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +3
Query: 33 GSQVTGDNKEKRRKESILDLSKYLEKSIRVKFAGGRE--AAGILKGYDPLLNLVLDNTTE 206
GS+VTG + EK+ + SI L + + GRE A G+++G D + +N+
Sbjct: 28712 GSEVTGFHVEKKERNSI------LWQKVNTSPISGREYRATGLVEGLDYQFRVYAENSAG 28765
Query: 207 FLRDPDDPYK 236
L P DP K
Sbjct: 28766 -LSSPSDPSK 28774
>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
Length = 26926
Score = 31.5 bits (68), Expect = 1.1
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +3
Query: 33 GSQVTGDNKEKRRKESILDLSKYLEKSIRVKFAGGRE--AAGILKGYDPLLNLVLDNTTE 206
GS+VTG + EK+ + SI L + + GRE A G+++G D + +N+
Sbjct: 21288 GSEVTGFHVEKKERNSI------LWQKVNTSPISGREYRATGLVEGLDYQFRVYAENSAG 21341
Query: 207 FLRDPDDPYK 236
L P DP K
Sbjct: 21342 -LSSPSDPSK 21350
>S75989-1|AAB33570.1| 632|Homo sapiens gamma-aminobutyric acid
transporter type 3 protein.
Length = 632
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -3
Query: 406 FFLMPYLKIYSYHNNYSYPSWLINGFGI 323
FFL+ Y K Y+N Y+YP+W G+GI
Sbjct: 530 FFLIKY-KPLKYNNIYTYPAW---GYGI 553
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,262,024
Number of Sequences: 237096
Number of extensions: 986532
Number of successful extensions: 5814
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 5772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5814
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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