Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16m15
         (686 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111398-1|AAI11399.1|  511|Homo sapiens SARS protein protein.         34   0.55 
X91257-1|CAA62635.1|  514|Homo sapiens seryl-tRNA synthetase pro...    31   5.1  
D49914-1|BAA95602.1|  514|Homo sapiens Seryl tRNA Synthetase pro...    31   5.1  
BC000716-1|AAH00716.1|  514|Homo sapiens seryl-tRNA synthetase p...    31   5.1  
AL356389-4|CAI13599.1|  514|Homo sapiens seryl-tRNA synthetase p...    31   5.1  
AK222677-1|BAD96397.1|  514|Homo sapiens seryl-tRNA synthetase v...    31   5.1  

>BC111398-1|AAI11399.1|  511|Homo sapiens SARS protein protein.
          Length = 511

 Score = 33.9 bits (74), Expect = 0.55
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
 Frame = +1

Query: 169 YSYLPRKMDKLKFEFMVKASEDVKTNTICITTITDFDGRTFTIPDKLQPVKLHDKI---V 339
           Y    + MDK++F  M+ A+    T TIC         +  T+P+K  P  L + I    
Sbjct: 410 YGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKFMPPGLQELIPFVK 469

Query: 340 QTEIFQKVKATLQKRHE 390
              I Q+     +K+HE
Sbjct: 470 PAPIEQEPSKKQKKQHE 486


>X91257-1|CAA62635.1|  514|Homo sapiens seryl-tRNA synthetase
           protein.
          Length = 514

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 169 YSYLPRKMDKLKFEFMVKASEDVKTNTICITTITDFDGRTFTIPDKLQ 312
           Y    + MDK++F  M+ A+    T TIC         +  T+P+KL+
Sbjct: 410 YGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLK 457


>D49914-1|BAA95602.1|  514|Homo sapiens Seryl tRNA Synthetase
           protein.
          Length = 514

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 169 YSYLPRKMDKLKFEFMVKASEDVKTNTICITTITDFDGRTFTIPDKLQ 312
           Y    + MDK++F  M+ A+    T TIC         +  T+P+KL+
Sbjct: 410 YGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLK 457


>BC000716-1|AAH00716.1|  514|Homo sapiens seryl-tRNA synthetase
           protein.
          Length = 514

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 169 YSYLPRKMDKLKFEFMVKASEDVKTNTICITTITDFDGRTFTIPDKLQ 312
           Y    + MDK++F  M+ A+    T TIC         +  T+P+KL+
Sbjct: 410 YGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLK 457


>AL356389-4|CAI13599.1|  514|Homo sapiens seryl-tRNA synthetase
           protein.
          Length = 514

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 169 YSYLPRKMDKLKFEFMVKASEDVKTNTICITTITDFDGRTFTIPDKLQ 312
           Y    + MDK++F  M+ A+    T TIC         +  T+P+KL+
Sbjct: 410 YGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLK 457


>AK222677-1|BAD96397.1|  514|Homo sapiens seryl-tRNA synthetase
           variant protein.
          Length = 514

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 169 YSYLPRKMDKLKFEFMVKASEDVKTNTICITTITDFDGRTFTIPDKLQ 312
           Y    + MDK++F  M+ A+    T TIC         +  T+P+KL+
Sbjct: 410 YGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLK 457


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,340,502
Number of Sequences: 237096
Number of extensions: 1941735
Number of successful extensions: 3742
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3742
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)