Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16m15
         (686 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82284-5|CAB05291.1|  418|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AC024810-9|AAF60766.1|  547|Caenorhabditis elegans Hypothetical ...    29   4.1  
AC024780-6|AAF60569.1|  259|Caenorhabditis elegans Ribosomal pro...    29   4.1  
U40420-9|AAA81436.1|  320|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AC006723-6|AAF59425.1|  492|Caenorhabditis elegans Hypothetical ...    28   5.4  
Z83116-8|CAB05567.1|  397|Caenorhabditis elegans Hypothetical pr...    28   7.2  
U80023-9|AAG24041.1|  257|Caenorhabditis elegans Hypothetical pr...    27   9.5  
U21323-7|AAA62551.1|  465|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>Z82284-5|CAB05291.1|  418|Caenorhabditis elegans Hypothetical
           protein T27E7.6 protein.
          Length = 418

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
 Frame = +1

Query: 154 IKQHFYSYLPRKMDKLKFEFMVKASEDVKTNTICITTITDFDGRTFTIPDKLQPVKL--H 327
           IK+H  +    ++ + +   +  +  D K   IC+TT++DF+     I DK Q +KL  H
Sbjct: 307 IKRH-KTLFDNRVARFRKNVVTSSFTDAKLYEICMTTVSDFE----KIMDK-QDMKLVCH 360

Query: 328 --DKIVQTEIFQKVK 366
              K V+ + F+K+K
Sbjct: 361 HLPKAVENQDFKKIK 375


>AC024810-9|AAF60766.1|  547|Caenorhabditis elegans Hypothetical
           protein Y54E10A.12 protein.
          Length = 547

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +1

Query: 442 DEDGNKQFMGYLLEEQTSTTGVSEESLARIIEKFSEIKKDSSKPFNIGRMAEKFVIE 612
           DE G   F G L +E+  +    E S+A  + +FS+ +  ++   N+ +  EK V+E
Sbjct: 442 DESGVNAFFGQLSDEKEESPTAVEFSMAAHLTEFSQRQAAAAAKMNM-KTPEKKVVE 497


>AC024780-6|AAF60569.1|  259|Caenorhabditis elegans Ribosomal
           protein, small subunitprotein 4 protein.
          Length = 259

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = +1

Query: 175 YLPRKMDKLKFEFMVKASEDVKTNTICITTITDFDGRTFTIPDKLQPVKLHDKIVQTEIF 354
           Y+  ++   + +F +   + V+T    +  +T  DGRT   PD    VK++D IV     
Sbjct: 108 YVVHRIQAAEADFKLCKVKSVRTVNKGVPVLTTTDGRTIRYPD--PHVKVNDTIVFNIST 165

Query: 355 QKV 363
           QK+
Sbjct: 166 QKI 168


>U40420-9|AAA81436.1|  320|Caenorhabditis elegans Hypothetical
           protein F40F4.1 protein.
          Length = 320

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
 Frame = +1

Query: 166 FYSYLPRKMDKLKFEFMVKASEDVKTNTICITTITDFDGRTFTIPDKLQPVKLHDKIVQ- 342
           +  +L   ++++K +      ++  T +IC     DFD R F  P K+     H KI++ 
Sbjct: 139 YVDHLLDVLNRVKLDEFAINKDNYCTESIC-DEFRDFDIRCFMNPRKMSDSLFHQKIMRH 197

Query: 343 TEIFQKVKATLQKRHEKRQVWI-SMNPQMK 429
             IF +V     + +   + WI   NP+++
Sbjct: 198 IAIFGQVAIDSNQLNLFVRHWIKGSNPRLE 227


>AC006723-6|AAF59425.1|  492|Caenorhabditis elegans Hypothetical
           protein Y19D10B.6 protein.
          Length = 492

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 29/126 (23%), Positives = 50/126 (39%)
 Frame = +1

Query: 145 KYIIKQHFYSYLPRKMDKLKFEFMVKASEDVKTNTICITTITDFDGRTFTIPDKLQPVKL 324
           +Y  + H Y Y+ +K D  KF F V+  E+V    + +T I  F    +     L  + L
Sbjct: 98  EYFFETH-YEYISKKNDSEKFSFAVETLENV---NLTLTNI--FYNSLYANIKVLNQLNL 151

Query: 325 HDKIVQTEIFQKVKATLQKRHEKRQVWISMNPQMKADYCDEDGNKQFMGYLLEEQTSTTG 504
                +   F    + L K +   ++W S          DE+ N   + + L +  + T 
Sbjct: 152 --PAAEENKFLHHISNLLKNNTIEEIWSSSLSNKSKKVLDEELNNSKVFFGLLDYNNVTM 209

Query: 505 VSEESL 522
           + E  L
Sbjct: 210 LEETKL 215


>Z83116-8|CAB05567.1|  397|Caenorhabditis elegans Hypothetical
           protein M01B2.10 protein.
          Length = 397

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -1

Query: 404 HTCRFSCRFCNVAFTF*KISVCTILSCNFTGCNLSGIVKVRP 279
           H+  F+  +CN A+ +  I +C I S ++  CN   ++K+ P
Sbjct: 283 HSFYFADFYCNKAYHYATIVICEIGSTSYKYCN-EKLIKLDP 323


>U80023-9|AAG24041.1|  257|Caenorhabditis elegans Hypothetical
           protein F07C4.10 protein.
          Length = 257

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
 Frame = -1

Query: 488 CSSNRYP-INCLFPSSSQ*SAFICGFMDIHTCRFSCRFCNVAFTF*KISVCT--ILSCNF 318
           CS+  +P +NC   + +Q ++     +    C  SC FCN+      ++ C   +  CN 
Sbjct: 119 CSNVAFPRLNCASITKTQCNSIAWRTIIAQDCPASCGFCNMGGCVDAVTDCANDVSICNV 178

Query: 317 TG 312
            G
Sbjct: 179 VG 180


>U21323-7|AAA62551.1|  465|Caenorhabditis elegans Hypothetical
           protein C45G9.8 protein.
          Length = 465

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 481 EEQTSTTGVSEESLARIIEKFSEIKKDSSKPFNIGRMAEK 600
           E ++   G S++SL+ +IEK  E     + P    RMA +
Sbjct: 415 ESKSDDEGKSDKSLSFVIEKQEEFIYSRANPIETARMARR 454


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,643,634
Number of Sequences: 27780
Number of extensions: 337147
Number of successful extensions: 871
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)