Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16m13
         (415 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039047-9|AAB94228.1|  303|Caenorhabditis elegans Hypothetical ...    31   0.25 
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr...    30   0.58 
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr...    30   0.58 
Z92782-12|CAH60765.1|  328|Caenorhabditis elegans Hypothetical p...    27   5.4  
Z92782-9|CAE17814.1|  329|Caenorhabditis elegans Hypothetical pr...    27   5.4  
AC024761-14|AAM97970.1|   98|Caenorhabditis elegans Peroxiredoxi...    27   5.4  
AC024761-13|AAP13758.1|  353|Caenorhabditis elegans Peroxiredoxi...    27   5.4  
AC024761-12|AAM97969.1|  387|Caenorhabditis elegans Peroxiredoxi...    27   5.4  
AL021175-2|CAA15966.1|  322|Caenorhabditis elegans Hypothetical ...    27   7.1  
X59156-1|CAA41870.1|   77|Caenorhabditis elegans transposase pro...    26   9.4  

>AF039047-9|AAB94228.1|  303|Caenorhabditis elegans Hypothetical
           protein K11D12.8 protein.
          Length = 303

 Score = 31.5 bits (68), Expect = 0.25
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -3

Query: 218 YFI*LYSRMANYDFFPNKFLSLFALFPWFKEPKL 117
           YF    +  ANY FF   F  LF +FP  K+PKL
Sbjct: 221 YFFSQTNFKANYSFFVVFFYLLFFIFPVLKKPKL 254


>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
           protein T01H10.8 protein.
          Length = 2692

 Score = 30.3 bits (65), Expect = 0.58
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = -1

Query: 214 LYNYIQEWLIMIFFRINSFHCLPYFLGL 131
           L NY+ E ++ +F ++N++H L +FL L
Sbjct: 487 LRNYMAEKIVFVFQKLNNYHALNHFLML 514


>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
           protein T01H10.8 protein.
          Length = 2692

 Score = 30.3 bits (65), Expect = 0.58
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = -1

Query: 214 LYNYIQEWLIMIFFRINSFHCLPYFLGL 131
           L NY+ E ++ +F ++N++H L +FL L
Sbjct: 487 LRNYMAEKIVFVFQKLNNYHALNHFLML 514


>Z92782-12|CAH60765.1|  328|Caenorhabditis elegans Hypothetical
           protein F14F8.13 protein.
          Length = 328

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 205 YIQEWLIMIFFRINSFHCLPYFLGLKNQN 119
           YI   LI+IF  I S+  LP+++ + N N
Sbjct: 15  YISSELILIFICIVSYSTLPFYIYVHNLN 43


>Z92782-9|CAE17814.1|  329|Caenorhabditis elegans Hypothetical
           protein F14F8.12 protein.
          Length = 329

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 205 YIQEWLIMIFFRINSFHCLPYFLGLKNQN 119
           YI   LI+IF  I S+  LP+++ + N N
Sbjct: 15  YISSELILIFICIVSYSTLPFYIYVHNLN 43


>AC024761-14|AAM97970.1|   98|Caenorhabditis elegans Peroxiredoxin
           protein 6, isoform b protein.
          Length = 98

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 358 FFYLAIFDIFYIYFPRCCIVFL 293
           FF L IF IF ++F   C++F+
Sbjct: 31  FFILFIFPIFLVFFIYGCVIFV 52


>AC024761-13|AAP13758.1|  353|Caenorhabditis elegans Peroxiredoxin
           protein 6, isoform c protein.
          Length = 353

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 358 FFYLAIFDIFYIYFPRCCIVFL 293
           FF L IF IF ++F   C++F+
Sbjct: 52  FFILFIFPIFLVFFIYGCVIFV 73


>AC024761-12|AAM97969.1|  387|Caenorhabditis elegans Peroxiredoxin
           protein 6, isoform a protein.
          Length = 387

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 358 FFYLAIFDIFYIYFPRCCIVFL 293
           FF L IF IF ++F   C++F+
Sbjct: 52  FFILFIFPIFLVFFIYGCVIFV 73


>AL021175-2|CAA15966.1|  322|Caenorhabditis elegans Hypothetical
           protein Y6E2A.2 protein.
          Length = 322

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -1

Query: 343 IFDIFYIYFPRCCIVFLKSLFIVRRQVNNVC*IHFSI 233
           +   F++YFP  C++ L    I  +++ N+  I  +I
Sbjct: 259 VIPFFFMYFPVSCMILLPLFGIKVKEIGNIAPIFAAI 295


>X59156-1|CAA41870.1|   77|Caenorhabditis elegans transposase
           protein.
          Length = 77

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 367 QMIFFYLAIFDIFYIYF 317
           Q IFF+  IF +FY+ F
Sbjct: 50  QFIFFFFNIFQLFYVVF 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,396,573
Number of Sequences: 27780
Number of extensions: 129928
Number of successful extensions: 300
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 300
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)