BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16m11
(706 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002457-1|AAH02457.1| 251|Homo sapiens Der1-like domain family... 203 4e-52
AY358818-1|AAQ89177.1| 251|Homo sapiens SDIG243 protein. 203 4e-52
CR457202-1|CAG33483.1| 239|Homo sapiens F-LANa protein. 86 1e-16
BC010890-1|AAH10890.1| 239|Homo sapiens Der1-like domain family... 86 1e-16
AF242523-1|AAF99603.1| 239|Homo sapiens hypothetical transmembr... 86 1e-16
AF208065-1|AAL14869.1| 239|Homo sapiens F-LANa protein. 86 1e-16
AF132289-1|AAG43049.1| 239|Homo sapiens F-LAN-1 protein. 86 1e-16
CR456372-1|CAG30258.1| 239|Homo sapiens Em:AP000350.1 protein. 82 2e-15
BC057830-1|AAH57830.1| 235|Homo sapiens Der1-like domain family... 82 2e-15
AB049213-1|BAB68409.1| 233|Homo sapiens putative NADH oxidoredu... 82 2e-15
AF151859-1|AAD34096.1| 209|Homo sapiens CGI-101 protein protein. 74 6e-13
>BC002457-1|AAH02457.1| 251|Homo sapiens Der1-like domain family,
member 1 protein.
Length = 251
Score = 203 bits (496), Expect = 4e-52
Identities = 84/145 (57%), Positives = 107/145 (73%)
Frame = +1
Query: 232 MSEFRDWYNGVPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTALF 411
MS+ DW+ +P TRYW T+ + L GK GL+SP Y L F +FQIWRP+TA F
Sbjct: 1 MSDIGDWFRSIPAITRYWFAATVAVPLVGKLGLISPAYLFLWPEAFLYRFQIWRPITATF 60
Query: 412 YYPINPGTGFHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLVKLPV 591
Y+P+ PGTGF +L+N YFLY YS RLETG F G+PADY +MLLFNW+C VI GL + + +
Sbjct: 61 YFPVGPGTGFLYLVNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMDMQL 120
Query: 592 LMDPMVLSVLYVWCQLNKDVIVSFW 666
LM P+++SVLYVW QLN+D+IVSFW
Sbjct: 121 LMIPLIMSVLYVWAQLNRDMIVSFW 145
>AY358818-1|AAQ89177.1| 251|Homo sapiens SDIG243 protein.
Length = 251
Score = 203 bits (496), Expect = 4e-52
Identities = 84/145 (57%), Positives = 107/145 (73%)
Frame = +1
Query: 232 MSEFRDWYNGVPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTALF 411
MS+ DW+ +P TRYW T+ + L GK GL+SP Y L F +FQIWRP+TA F
Sbjct: 1 MSDIGDWFRSIPAITRYWFAATVAVPLVGKLGLISPAYLFLWPEAFLYRFQIWRPITATF 60
Query: 412 YYPINPGTGFHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLVKLPV 591
Y+P+ PGTGF +L+N YFLY YS RLETG F G+PADY +MLLFNW+C VI GL + + +
Sbjct: 61 YFPVGPGTGFLYLVNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMDMQL 120
Query: 592 LMDPMVLSVLYVWCQLNKDVIVSFW 666
LM P+++SVLYVW QLN+D+IVSFW
Sbjct: 121 LMIPLIMSVLYVWAQLNRDMIVSFW 145
>CR457202-1|CAG33483.1| 239|Homo sapiens F-LANa protein.
Length = 239
Score = 86.2 bits (204), Expect = 1e-16
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Frame = +1
Query: 253 YNGVPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTA-LFYYPINP 429
Y +P +R + T ++ + + L++P+ + F FQIWR +T LF+ P+
Sbjct: 10 YLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITNFLFFGPV-- 67
Query: 430 GTGFHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLVKLPVLMDPMV 609
GF+FL N FLY Y + LE G F G+ AD+ +M LF + GL V L L
Sbjct: 68 --GFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFLGQAFT 125
Query: 610 LSVLYVWCQLNKDVIVSFW 666
+ ++YVW + N V ++F+
Sbjct: 126 IMLVYVWSRRNPYVRMNFF 144
>BC010890-1|AAH10890.1| 239|Homo sapiens Der1-like domain family,
member 2 protein.
Length = 239
Score = 86.2 bits (204), Expect = 1e-16
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Frame = +1
Query: 253 YNGVPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTA-LFYYPINP 429
Y +P +R + T ++ + + L++P+ + F FQIWR +T LF+ P+
Sbjct: 10 YLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITNFLFFGPV-- 67
Query: 430 GTGFHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLVKLPVLMDPMV 609
GF+FL N FLY Y + LE G F G+ AD+ +M LF + GL V L L
Sbjct: 68 --GFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFLGQAFT 125
Query: 610 LSVLYVWCQLNKDVIVSFW 666
+ ++YVW + N V ++F+
Sbjct: 126 IMLVYVWSRRNPYVRMNFF 144
>AF242523-1|AAF99603.1| 239|Homo sapiens hypothetical transmembrane
protein SBBI53 protein.
Length = 239
Score = 86.2 bits (204), Expect = 1e-16
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Frame = +1
Query: 253 YNGVPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTA-LFYYPINP 429
Y +P +R + T ++ + + L++P+ + F FQIWR +T LF+ P+
Sbjct: 10 YLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITNFLFFGPV-- 67
Query: 430 GTGFHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLVKLPVLMDPMV 609
GF+FL N FLY Y + LE G F G+ AD+ +M LF + GL V L L
Sbjct: 68 --GFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFLGQAFT 125
Query: 610 LSVLYVWCQLNKDVIVSFW 666
+ ++YVW + N V ++F+
Sbjct: 126 IMLVYVWSRRNPYVRMNFF 144
>AF208065-1|AAL14869.1| 239|Homo sapiens F-LANa protein.
Length = 239
Score = 86.2 bits (204), Expect = 1e-16
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Frame = +1
Query: 253 YNGVPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTA-LFYYPINP 429
Y +P +R + T ++ + + L++P+ + F FQIWR +T LF+ P+
Sbjct: 10 YLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITNFLFFGPV-- 67
Query: 430 GTGFHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLVKLPVLMDPMV 609
GF+FL N FLY Y + LE G F G+ AD+ +M LF + GL V L L
Sbjct: 68 --GFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFLGQAFT 125
Query: 610 LSVLYVWCQLNKDVIVSFW 666
+ ++YVW + N V ++F+
Sbjct: 126 IMLVYVWSRRNPYVRMNFF 144
>AF132289-1|AAG43049.1| 239|Homo sapiens F-LAN-1 protein.
Length = 239
Score = 86.2 bits (204), Expect = 1e-16
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Frame = +1
Query: 253 YNGVPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTA-LFYYPINP 429
Y +P +R + T ++ + + L++P+ + F FQIWR +T LF+ P+
Sbjct: 10 YLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITNFLFFGPV-- 67
Query: 430 GTGFHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLVKLPVLMDPMV 609
GF+FL N FLY Y + LE G F G+ AD+ +M LF + GL V L L
Sbjct: 68 --GFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFLGQAFT 125
Query: 610 LSVLYVWCQLNKDVIVSFW 666
+ ++YVW + N V ++F+
Sbjct: 126 IMLVYVWSRRNPYVRMNFF 144
>CR456372-1|CAG30258.1| 239|Homo sapiens Em:AP000350.1 protein.
Length = 239
Score = 82.2 bits (194), Expect = 2e-15
Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 1/136 (0%)
Frame = +1
Query: 262 VPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTA-LFYYPINPGTG 438
VP TR + ++ + + L+SP+ + + F +FQ+WR +T LF+ P+ G
Sbjct: 13 VPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTNFLFFGPL----G 68
Query: 439 FHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLVKLPVLMDPMVLSV 618
F F N F++ Y + LE G F G+ AD+ +M LF V ++GLL L L ++ +
Sbjct: 69 FSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFLGQALMAML 128
Query: 619 LYVWCQLNKDVIVSFW 666
+YVW + + V V+F+
Sbjct: 129 VYVWSRRSPRVRVNFF 144
>BC057830-1|AAH57830.1| 235|Homo sapiens Der1-like domain family,
member 3 protein.
Length = 235
Score = 82.2 bits (194), Expect = 2e-15
Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 1/136 (0%)
Frame = +1
Query: 262 VPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTA-LFYYPINPGTG 438
VP TR + ++ + + L+SP+ + + F +FQ+WR +T LF+ P+ G
Sbjct: 13 VPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTNFLFFGPL----G 68
Query: 439 FHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLVKLPVLMDPMVLSV 618
F F N F++ Y + LE G F G+ AD+ +M LF V ++GLL L L ++ +
Sbjct: 69 FSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFLGQALMAML 128
Query: 619 LYVWCQLNKDVIVSFW 666
+YVW + + V V+F+
Sbjct: 129 VYVWSRRSPRVRVNFF 144
>AB049213-1|BAB68409.1| 233|Homo sapiens putative NADH
oxidoreductase complex I subunit homolog. protein.
Length = 233
Score = 82.2 bits (194), Expect = 2e-15
Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 1/136 (0%)
Frame = +1
Query: 262 VPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTA-LFYYPINPGTG 438
VP TR + ++ + + L+SP+ + + F +FQ+WR +T LF+ P+ G
Sbjct: 13 VPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTNFLFFGPL----G 68
Query: 439 FHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLVKLPVLMDPMVLSV 618
F F N F++ Y + LE G F G+ AD+ +M LF V ++GLL L L ++ +
Sbjct: 69 FSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFLGQALMAML 128
Query: 619 LYVWCQLNKDVIVSFW 666
+YVW + + V V+F+
Sbjct: 129 VYVWSRRSPRVRVNFF 144
>AF151859-1|AAD34096.1| 209|Homo sapiens CGI-101 protein protein.
Length = 209
Score = 73.7 bits (173), Expect = 6e-13
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Frame = +1
Query: 253 YNGVPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTA-LFYYPINP 429
Y +P +R + T ++ + + L++P+ + F FQIWR +T LF+ P+
Sbjct: 10 YLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITNFLFFGPV-- 67
Query: 430 GTGFHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLVKLPVL 594
GF+FL N FLY Y + LE G F G+ AD+ +M LF + GL V L L
Sbjct: 68 --GFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFL 120
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,131,285
Number of Sequences: 237096
Number of extensions: 2301323
Number of successful extensions: 4230
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4221
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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