Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16m09
(706 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 34 0.096
01_06_1533 + 38041499-38041681,38041853-38041985,38042816-380429... 31 0.89
02_01_0726 + 5440341-5440661,5441574-5441620,5442917-5442977,544... 30 1.6
08_02_0707 - 20212190-20214592 30 2.1
12_02_1212 - 27043723-27044241,27044483-27044850,27045513-27045753 29 3.6
03_05_0509 - 25032494-25033156 29 3.6
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565... 29 4.8
02_04_0083 + 19566476-19566539,19566781-19567006,19567206-195673... 29 4.8
02_02_0694 + 13013966-13014361 29 4.8
11_03_0052 + 9330778-9330816,9330963-9331174,9331498-9333634 28 6.3
02_03_0074 + 14781763-14784191,14784888-14784978,14785180-147852... 28 6.3
11_01_0359 - 2731522-2732346 28 8.3
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 28 8.3
06_01_0220 - 1673657-1675765 28 8.3
05_03_0242 + 10823312-10823342,10823662-10823732,10824010-108240... 28 8.3
04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355 28 8.3
02_05_0410 + 28744716-28744841,28745361-28745965,28746151-287462... 28 8.3
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 34.3 bits (75), Expect = 0.096
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +3
Query: 270 RSHSFHTHHYVSNHSDHFHHIHRG--RSARTSRPKGW 374
R H H H + +H DH HH H G + R P W
Sbjct: 537 RHHHDHRHRHGHSHGDHHHHYHGGHHQRRRHHHPPAW 573
>01_06_1533 +
38041499-38041681,38041853-38041985,38042816-38042954,
38043331-38043367,38045606-38045897,38046384-38046502
Length = 300
Score = 31.1 bits (67), Expect = 0.89
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +2
Query: 284 PYTPLRFEPFRPFPSYPQRAFSSNIEAQRLAFEAAQKAFDLTSNQAGYIPGFDRF-PIFN 460
PY + P+ P SYP ++ AQ + AA A + AG + G F P F
Sbjct: 147 PYHVYGYSPYSPDYSYPTNYYNIYGGAQYPFYGAAAAA---AAAAAGMVTGSSPFYPYFQ 203
Query: 461 FPSPGFTDEQFPAMQNY 511
F G T + + Q Y
Sbjct: 204 FGQSGSTTTNYASGQGY 220
>02_01_0726 +
5440341-5440661,5441574-5441620,5442917-5442977,
5442978-5443035,5443303-5443463,5443692-5443808,
5443888-5443989,5444834-5444908,5444996-5445084,
5445171-5445220,5445562-5445641,5445744-5445953,
5446103-5446170,5446363-5446423,5446719-5447081
Length = 620
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 291 HHYVSNHSDHFHHIHRGRSARTSRP 365
HH+ H H HH H G SA + P
Sbjct: 567 HHHHHGHHHHGHHHHEGSSAAAAAP 591
>08_02_0707 - 20212190-20214592
Length = 800
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 249 SDSPPSGRSHSFHTHHYVSNHSDHFHHIH 335
S S SHS H+H +V H DH +H H
Sbjct: 501 SHSHSHSHSHS-HSHSHVHGHEDHHNHDH 528
>12_02_1212 - 27043723-27044241,27044483-27044850,27045513-27045753
Length = 375
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = +3
Query: 186 YPTTGESVPSRIKIHQAIDHFSDSPPSGRSHSFHTHHYVSN----HSDHFHHIHRG-RSA 350
Y + + I IDH SD+ + RSHS H V++ S H G S+
Sbjct: 270 YAGSASMAAAAANIVDVIDHSSDAETTTRSHSHSQSHLVADIRHRQSPFMLDFHAGTASS 329
Query: 351 RTSRPKGW 374
+S GW
Sbjct: 330 SSSTAAGW 337
>03_05_0509 - 25032494-25033156
Length = 220
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 267 GRSHSFHTHHYVSNHSDHFHHIHRGRSA 350
GRS S HH+ +H H H HR ++
Sbjct: 4 GRSSSSSRHHHGHHHHHHHHRRHRSETS 31
>03_05_0754 + 27452203-27452242,27452360-27455611,27456480-27456533,
27456774-27456872,27456948-27457012,27457476-27457575,
27458326-27458408,27458494-27458569,27458920-27459698
Length = 1515
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -1
Query: 586 GINGSNLVTETRASRGSGERAELIRIVLHRGELFVGESGRWEI 458
G+NG E +RG R E + +V H GEL VG E+
Sbjct: 1382 GVNGGG--DEHPEARGRPRRPEAVVLVAHVGELLVGGDRHQEV 1422
>02_04_0083 +
19566476-19566539,19566781-19567006,19567206-19567389,
19569483-19569582,19570015-19570122,19570373-19570452,
19570566-19570644,19570774-19570832,19570938-19571006,
19571577-19571690,19571772-19571840,19572340-19572361,
19572455-19572522,19573630-19573715,19574220-19574349,
19575032-19575133,19575211-19575279
Length = 542
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 137 ILMVCAICLVLAVGNALPNNRGVGAFAYQD-SSGNRP 244
+LMVC I L+L G L + GA+ +D ++G+ P
Sbjct: 9 LLMVCLILLLLCSGRGLSDELRCGAWTVEDAAAGDEP 45
>02_02_0694 + 13013966-13014361
Length = 131
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 186 YPTTGESVPSRIKIHQAIDHFSD-SPPSGRSHSFHTHHYVSNHSDHFHHIH 335
+P +P+R K+ A+ F D S PS + + HH+ +H H H H
Sbjct: 43 HPALALHLPTR-KMLLAVASFDDASSPSSLTTTDRHHHHHRHHGHHHHRGH 92
>11_03_0052 + 9330778-9330816,9330963-9331174,9331498-9333634
Length = 795
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 153 PFVWCWLLETLYPTTGESVPSRIKIHQAID-HFSDSPPSGRSHSFHTHHYVSN 308
PF W LL+ L PTT + +R+ I + F D P +S + Y +N
Sbjct: 355 PFEWDALLQQLMPTTEAKLSNRMTIERIFSTSFDDLPHDLKSCFLYFAAYPTN 407
>02_03_0074 +
14781763-14784191,14784888-14784978,14785180-14785230,
14785882-14785947,14786509-14786610
Length = 912
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +3
Query: 249 SDSPPSGRSHSFHTHHYVSNHSDHFHHIHRGRSARTSRPKGW 374
S PS H H S H HH H G R S P +
Sbjct: 147 SSIAPSSPRHPHHHSQPQQPQSHHHHHHHSGSRKRHSMPPAY 188
>11_01_0359 - 2731522-2732346
Length = 274
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +3
Query: 243 HFSDSPPSGRSHSFHTHHYVSNHSDHFH 326
H PP H++H HHY H H
Sbjct: 47 HSHSHPPPPPPHAYHHHHYPPPPPPHHH 74
>06_03_0867 +
25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 273 SHSFHTHHYVSNHSDHFHH 329
SHS H +H +H H HH
Sbjct: 51 SHSHHQYHLPDHHHHHHHH 69
>06_01_0220 - 1673657-1675765
Length = 702
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 127 YEEYINGLCHLFGVGCWKRSTQQQGSRCLRVSR 225
Y+E + GL +LFG R +Q G C V+R
Sbjct: 579 YQEALGGLHNLFGGPSVVRVSQSDGPHCFAVTR 611
>05_03_0242 +
10823312-10823342,10823662-10823732,10824010-10824021,
10827329-10827394,10827564-10827766,10827977-10828266,
10828377-10828468,10829876-10830344,10830670-10830978,
10831290-10831364,10831457-10831614
Length = 591
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +3
Query: 156 FVWCWLLETLYPTTGESVPSRIKIHQAIDHFSDSPP 263
++W +++T PTTG SV + ++QAI ++ D+ P
Sbjct: 501 YIWQEIVQTETPTTG-SVHDQRVLNQAIQYYLDNFP 535
>04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355
Length = 1109
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = +3
Query: 186 YPTTG-ESVPSRIKIHQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHRGRSARTSR 362
+P G P ++ + DH + H HH+ H H + R +RT
Sbjct: 106 FPELGIGGTPVLVRRWRPRDHRDQHDHQSQRHHHRHHHHQRQRHHHHHQRQQRRGSRTRD 165
Query: 363 PKGWRSKPLK 392
P+ R PL+
Sbjct: 166 PR-VRRGPLR 174
>02_05_0410 +
28744716-28744841,28745361-28745965,28746151-28746270,
28746597-28746737,28748626-28749370
Length = 578
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 186 YPTTGESVPSRIKIHQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHR 338
+PT ++ + H A + S+S SG S + + S+HS + HH H+
Sbjct: 370 WPTQRNALAGSTRSHHAKNSSSNSSSSGASSASKNN---SSHSGYHHHHHQ 417
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,148,762
Number of Sequences: 37544
Number of extensions: 422457
Number of successful extensions: 1261
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1234
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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