Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16m09
         (706 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    28   0.25 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         28   0.33 
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         28   0.33 
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          27   0.57 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   1.3  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   1.3  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    26   1.3  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    26   1.3  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   3.1  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   4.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   4.1  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   5.4  
Y13592-1|CAA73920.1|  136|Anopheles gambiae voltage-gated sodium...    23   7.1  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   7.1  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   7.1  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    23   9.4  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +3

Query: 261 PSGRSHSFHTHHYVSNHSDHFHHIHRGRSARTSRPKGWRSKP 386
           PS      H  H   +H  H HH H  +   ++ P+ +   P
Sbjct: 169 PSSYHQQQHPGHSQHHHHHHHHHPHHSQQQHSASPRCYPMPP 210



 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/32 (28%), Positives = 12/32 (37%)
 Frame = +3

Query: 231 QAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFH 326
           Q   +     P    H  H HH+  +HS   H
Sbjct: 168 QPSSYHQQQHPGHSQHHHHHHHHHPHHSQQQH 199


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 258 PPSGRSHSFHTHHYVSNHSDHFHHIHRGRSARTSRP 365
           PP    H  H  H + +H  H HH  +  S +TS P
Sbjct: 91  PPHHHQHPHH--HQLPHHPHHQHHPQQQPSPQTSPP 124


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 258 PPSGRSHSFHTHHYVSNHSDHFHHIHRGRSARTSRP 365
           PP    H  H  H + +H  H HH  +  S +TS P
Sbjct: 91  PPHHHQHPHH--HQLPHHPHHQHHPQQQPSPQTSPP 124


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 27.1 bits (57), Expect = 0.57
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 8/62 (12%)
 Frame = +3

Query: 222 KIHQAIDHFSDSPPSGRSHSFHTHHYV---SNHSDHFHH-----IHRGRSARTSRPKGWR 377
           K  Q   H S  P   + H  H HH+     N +DHF +     I R  SA+  + +  R
Sbjct: 635 KADQTDHHQSQQPQQQQQHQHHHHHHHHHHQNPNDHFVNTNTDTIKRSHSAQLPQREDAR 694

Query: 378 SK 383
           S+
Sbjct: 695 SR 696


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 10/37 (27%), Positives = 15/37 (40%)
 Frame = +3

Query: 228 HQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHR 338
           HQ   H S      + H    H   ++ + H HH H+
Sbjct: 254 HQQQQHPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQ 290



 Score = 23.4 bits (48), Expect = 7.1
 Identities = 23/99 (23%), Positives = 30/99 (30%), Gaps = 1/99 (1%)
 Frame = +3

Query: 249 SDSPPSGRSHSFHTHHY-VSNHSDHFHHIHRGRSARTSRPKGWRSKPLKKRSI*HRTRLV 425
           S SP  G  H    HH   +  + H HH H       S  +   S              V
Sbjct: 698 SGSPYGGGGHHLSHHHGGAAAATGHHHHQHHAAPHHHSLQQQHASSAFNSAGDARSGVAV 757

Query: 426 IFPVLTGSRYLISHRPDSPTNSSPRCRTIRISSARSPEP 542
              + TG        P   + S  RC    ++S   P P
Sbjct: 758 AAALNTGG----GGPPPDGSGSGSRCSKPSVTSTTPPTP 792


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 10/37 (27%), Positives = 15/37 (40%)
 Frame = +3

Query: 228 HQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHR 338
           HQ   H S      + H    H   ++ + H HH H+
Sbjct: 254 HQQQQHPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQ 290


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 10/37 (27%), Positives = 15/37 (40%)
 Frame = +3

Query: 228 HQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHR 338
           HQ   H S      + H    H   ++ + H HH H+
Sbjct: 206 HQQQQHPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQ 242


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 285 HTHHYVSNHSDHFHHIH 335
           H+HH   +H  H HH H
Sbjct: 496 HSHHAHPHHHHHHHHHH 512



 Score = 25.0 bits (52), Expect = 2.3
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = +3

Query: 213 SRIKIHQAIDHFSDSPPSGRSHSFHTH-HYVSNHSDHFHHIHRGRSA 350
           S +  H +  H S    S  + +  TH H+   H  H HH H   +A
Sbjct: 470 SSLHSHHSPHHVSPGMGSTVNGASLTHSHHAHPHHHHHHHHHHPTAA 516


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 258  PPSGRSHSFHTHHYVSNHSDHFHHIHRG 341
            PPS    + ++ H + +H  H HH H G
Sbjct: 1301 PPSRSEDTLNSSH-LHHHLHHGHHHHHG 1327


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 499 RGELFVGESGRWEIKYREP 443
           R EL    + RWE++YR+P
Sbjct: 493 RSELDRRNAHRWELQYRDP 511


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 249 SDSPPSGRSHSFHTHHYVSNHSDHFHHIH 335
           S +PP   S +  +H  V   S H HH+H
Sbjct: 796 SKAPPHPHS-ALSSHSPVGAGSHHLHHLH 823


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 14/53 (26%), Positives = 19/53 (35%), Gaps = 7/53 (13%)
 Frame = +3

Query: 228 HQAIDHFSDSPPSGRSHSFHTHHY-------VSNHSDHFHHIHRGRSARTSRP 365
           H  + H     PS    + H  HY       + +H  H HH H G +     P
Sbjct: 125 HPHLPHVQQHHPSVHHPAHHPLHYQPAAAAAMHHHHHHPHHHHPGLTGLMQAP 177


>Y13592-1|CAA73920.1|  136|Anopheles gambiae voltage-gated sodium
           channel protein.
          Length = 136

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 425 YIPGFDRFPIFNFPSPGFTD 484
           Y+   DRFP  + P   FTD
Sbjct: 41  YVDNVDRFPDHDLPRWNFTD 60


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 425  YIPGFDRFPIFNFPSPGFTD 484
            Y+   DRFP  + P   FTD
Sbjct: 956  YVDNVDRFPDHDLPRWNFTD 975


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 224 LDTRRHRLPCCWVERF 177
           ++TR H+LP C +E+F
Sbjct: 1   METRLHQLPPCILEQF 16


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 427 ITSLVRCQIERFLSGFERQP 368
           +T+L+  QIER +  FE+ P
Sbjct: 269 LTNLILDQIERAMVSFEKNP 288


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,589
Number of Sequences: 2352
Number of extensions: 16012
Number of successful extensions: 59
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)