Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16m03
         (685 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   4.7  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   4.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   6.3  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   8.3  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              21   8.3  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   8.3  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -2

Query: 588 QPWNSDLSELDFNKMPSFMYISNPKETIEAMNE 490
           Q WNS    L F   P+   I  PK  ++ + E
Sbjct: 334 QQWNSYWGILGFPSAPTIDGIFLPKHPLDLLRE 366


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -2

Query: 588 QPWNSDLSELDFNKMPSFMYISNPKETIEAMNE 490
           Q WNS    L F   P+   I  PK  ++ + E
Sbjct: 334 QQWNSYWGILGFPSAPTIDGIFLPKHPLDLLRE 366


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +1

Query: 403 FIQYLSNINVNSGFLDVIFEFTPLVVFYIFIHCFNC 510
           +   +  + + S  L  + E  PL  FYI  + FNC
Sbjct: 649 YANMIETMELTSLLLTKVAEDRPLPEFYIGGNPFNC 684


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -2

Query: 624 YHAVPKILPEYHQPWNSDLSELDFNK 547
           ++ VPK L  ++  +NSD+  +  N+
Sbjct: 520 FNNVPKKLNMFYNNFNSDIKSISNNE 545


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +2

Query: 137 GSYRTKDEYDCYVEGYVKCFWSLCDRHNSIDNFTEKRNEKII 262
           G+   +DE    V+ YV+C     +  +   NF EK    I+
Sbjct: 50  GNVNVEDEN---VQSYVECMMKKFNVVDENGNFNEKNTRDIV 88


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -2

Query: 624 YHAVPKILPEYHQPWNSDLSELDFNK 547
           ++ VPK L  ++  +NSD+  +  N+
Sbjct: 520 FNNVPKKLNMFYNNFNSDIKSISNNE 545


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,569
Number of Sequences: 438
Number of extensions: 3529
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)