Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16l18
         (161 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81142-9|CAB03501.2|  370|Caenorhabditis elegans Hypothetical pr...    26   4.1  
Z72512-3|CAA96665.2|  310|Caenorhabditis elegans Hypothetical pr...    26   4.1  
Z83111-4|CAB05535.2|  498|Caenorhabditis elegans Hypothetical pr...    25   7.2  
Z78019-1|CAB01456.1|  662|Caenorhabditis elegans Hypothetical pr...    25   7.2  
Z73424-4|CAA97778.2|  954|Caenorhabditis elegans Hypothetical pr...    25   7.2  
U21317-11|AAN60538.3|  509|Caenorhabditis elegans Hypothetical p...    25   7.2  
U21317-10|AAA62529.1|  753|Caenorhabditis elegans Hypothetical p...    25   7.2  

>Z81142-9|CAB03501.2|  370|Caenorhabditis elegans Hypothetical
           protein ZK1037.1 protein.
          Length = 370

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 1   DRDRVGHDSDFFEMETLNQSFVLCISFRCFN 93
           DR+ +  D+   +M   N + V+C  FR FN
Sbjct: 129 DREFLWEDNKMNDMGLTNLTTVICADFRIFN 159


>Z72512-3|CAA96665.2|  310|Caenorhabditis elegans Hypothetical
           protein R07B5.5 protein.
          Length = 310

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +1

Query: 25  SDFFEMETLNQSFVLCISFRCFNVIIHFCTIFKNKTDYHFPLQK 156
           S F+    L  + V  + +  +  ++ +C  FKNKT+ +  +QK
Sbjct: 164 SSFWNQYNLWGAIVTIVVY-VYTYLVVYCCAFKNKTEKNIMIQK 206


>Z83111-4|CAB05535.2|  498|Caenorhabditis elegans Hypothetical
           protein F57G8.5 protein.
          Length = 498

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 34  FEMETLNQSFVL-CISFRCFNVIIHFCTIFKNKTDYHFPLQKK 159
           F+  TL+   VL CIS  C  +I+    +       HF +++K
Sbjct: 351 FDFSTLSWKIVLLCISVICIGLIVRALLVMLTTHFSHFNVKEK 393


>Z78019-1|CAB01456.1|  662|Caenorhabditis elegans Hypothetical
           protein ZK863.4 protein.
          Length = 662

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 37  EMETLNQSFVLCISFRCFNVIIHFCTIFK 123
           E+ET  Q  ++ I +RCFN    F T F+
Sbjct: 224 ELETYPQEEIIKILYRCFNENSAFKTKFE 252


>Z73424-4|CAA97778.2|  954|Caenorhabditis elegans Hypothetical
           protein C44B9.1 protein.
          Length = 954

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 22  DSDFFEMETLNQSFVLCISFRCFNVIIHF 108
           DS+   +      FVLC SF+ F+ I++F
Sbjct: 335 DSEQASITFREMGFVLCRSFQAFHKILNF 363


>U21317-11|AAN60538.3|  509|Caenorhabditis elegans Hypothetical
           protein B0495.10b protein.
          Length = 509

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 4   RDRVGHDSDFFEMETLNQSFVLCISFRCFNVI 99
           +DR G D+ + ++E +  S  + +  RC +V+
Sbjct: 443 QDRRGSDTQYLDVEIMRGSLTVRVPERCHSVL 474


>U21317-10|AAA62529.1|  753|Caenorhabditis elegans Hypothetical
           protein B0495.10a protein.
          Length = 753

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 4   RDRVGHDSDFFEMETLNQSFVLCISFRCFNVI 99
           +DR G D+ + ++E +  S  + +  RC +V+
Sbjct: 681 QDRRGSDTQYLDVEIMRGSLTVRVPERCHSVL 712


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,811,506
Number of Sequences: 27780
Number of extensions: 56682
Number of successful extensions: 141
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 12,740,198
effective HSP length: 34
effective length of database: 11,795,678
effective search space used: 224117882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)