Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16l18
         (161 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   1.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   1.4  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    19   4.2  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    19   4.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   5.6  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    19   7.4  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 6/18 (33%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
 Frame = +1

Query: 61  FVLC-ISFRCFNVIIHFC 111
           F++C + F C N++  +C
Sbjct: 281 FLICWVPFFCVNIVTSYC 298


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 92  LKHLNDMHRTKL*FKVSISK 33
           +KH+N  H TK   K  +S+
Sbjct: 221 IKHINTRHNTKNGMKTLLSE 240


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 129 FIFKYCTEVYNYIKTSK*YAQNKTL 55
           F  KYC +VY  +   K + +  TL
Sbjct: 17  FSCKYCEKVYVSLGALKMHIRTHTL 41


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 38  KWRL*IKVLFCAYHLDVL 91
           KWR   K++   +HL+VL
Sbjct: 133 KWRNHRKLIAPTFHLNVL 150


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +1

Query: 16  GHDSDFFEM 42
           GHD D+F++
Sbjct: 239 GHDPDYFDI 247


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 7/29 (24%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
 Frame = +1

Query: 58  SFVLC-ISFRCFNVIIHFCTIFKNKTDYH 141
           + + C + F+ + + I  C I+     YH
Sbjct: 112 AIIACQMEFQLYPMDIQICPIYIESFSYH 140


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,463
Number of Sequences: 438
Number of extensions: 709
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 33
effective length of database: 131,889
effective search space used:  2637780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)