Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16l14
(662 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8D2.17 |||alpha-1,2-galactosyltransferase|Schizosaccharomyce... 29 0.60
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 28 1.0
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 27 3.2
SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomy... 26 4.2
SPCC1682.03c |mug174||meiotically upregulated gene Mug174|Schizo... 26 5.6
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 25 7.4
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 25 7.4
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 25 9.7
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 25 9.7
>SPBC8D2.17 |||alpha-1,2-galactosyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 351
Score = 29.1 bits (62), Expect = 0.60
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 12 RDC*H*GIC--YFSYLYFINQWNNYFLIQLSAISQKSSGFQVLQ 137
+DC + C F Y+++++ W+ FL+ L A + FQ L+
Sbjct: 291 QDCENAAACERIFEYVFYLSSWSLVFLLTLPATTINRENFQPLK 334
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 137 KTSVMASSEVTKLQQHLTLLKEEYGKLQSHCAEVERKYTLAAASAGDLSETS 292
+ S++ + + Q L+ +KE Y KL+S+C + + L LS+ S
Sbjct: 121 RLSMVEGQYMAQYDQKLSTIKEMYHKLESYCNRLGSPFVLPDFENSFLSDVS 172
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 26.6 bits (56), Expect = 3.2
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = +2
Query: 329 YGRETYSDIKIKLQNKSMPGHKFV----LNARSDDWNEEALKDFDELDWTSLPDD 481
+ +E + + + + SM G+K LN DWN+ + E T +PD+
Sbjct: 590 FEKEKQATLPRRRSSSSMKGNKLAEDSYLNEAGFDWNQGTFHNGSEFGTTGVPDE 644
>SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 26.2 bits (55), Expect = 4.2
Identities = 17/82 (20%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +2
Query: 113 VKRFPGVAKTSVMASSEVTKLQQHLTLLKEEY---GKLQSHCAEVERKYTLAAASAGDLS 283
VKRF + ASS+ +Q+ ++++E+ G ++H A+ + +
Sbjct: 718 VKRFFEIISKEQEASSQQENIQKAYEIIEKEFPTIGSAENHIAQFLEFWKTFMEGVKEAE 777
Query: 284 ETSFVARLLMTVATLYGRETYS 349
TS + +L+++ L + +S
Sbjct: 778 NTSAIGKLVLSKLFLTNQWIFS 799
>SPCC1682.03c |mug174||meiotically upregulated gene
Mug174|Schizosaccharomyces pombe|chr 3|||Manual
Length = 626
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 500 KWLYTDVVDLSRGDSFALQLMKSAAGFKLYGLVNK 604
+W++T +DLS S L+ + F GL +K
Sbjct: 16 QWIHTSQLDLSDSSSLVADLLYNIIKFNFSGLEDK 50
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 25.4 bits (53), Expect = 7.4
Identities = 14/61 (22%), Positives = 29/61 (47%)
Frame = +2
Query: 179 QHLTLLKEEYGKLQSHCAEVERKYTLAAASAGDLSETSFVARLLMTVATLYGRETYSDIK 358
+H+ + + YG L SH + + K L + L S + L++ A +G + ++K
Sbjct: 2420 EHMVICAKLYGALFSHLPDAQAK-QLLESKVLSLEIQSEFSVLILNAAVKFGSQKIIELK 2478
Query: 359 I 361
+
Sbjct: 2479 L 2479
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +2
Query: 434 ALKD--FDELDWTSLPDDVGSALLKWLYTDV 520
A+KD FDE W +PD S + W+ D+
Sbjct: 28 AVKDASFDERTWIWIPDSKESFVKAWIVEDL 58
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 564 FISCKAKESPLLKSTTSVYSHFNRADPTSS 475
FI A L+K TTS +H+ +AD S
Sbjct: 119 FIYLAASRETLIKRTTSRKNHYMKADMVES 148
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 335 RETYSDIKIKLQNKSMPGHKFVLNARS 415
++++SD+ I HKF+L ARS
Sbjct: 615 KQSFSDVTIYCGTSMFHSHKFILCARS 641
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,391,760
Number of Sequences: 5004
Number of extensions: 43238
Number of successful extensions: 155
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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