Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16l14
         (662 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92831-3|CAC70085.1|  276|Caenorhabditis elegans Hypothetical pr...   100   8e-22
Z68320-4|CAA92705.4|  448|Caenorhabditis elegans Hypothetical pr...    33   0.18 
AL008881-4|CAH10844.2|  448|Caenorhabditis elegans Hypothetical ...    33   0.18 
Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical pr...    32   0.32 
U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.       32   0.32 
AL110479-9|CAB60315.3|  583|Caenorhabditis elegans Hypothetical ...    31   0.73 
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical...    31   0.96 
U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z54238-8|CAA90998.3|  459|Caenorhabditis elegans Hypothetical pr...    27   9.0  
AC024211-6|AAF36067.2| 1454|Caenorhabditis elegans Hypothetical ...    27   9.0  

>Z92831-3|CAC70085.1|  276|Caenorhabditis elegans Hypothetical
           protein F22G12.6 protein.
          Length = 276

 Score =  100 bits (240), Expect = 8e-22
 Identities = 63/177 (35%), Positives = 96/177 (54%), Gaps = 7/177 (3%)
 Frame = +2

Query: 149 MASSEVTKLQQHLTLLKEEYGKLQSHCAEVERKYTLAAASAGDLSETSFVARLLMTVATL 328
           M S++  K+  +L +LKE++  LQS   E+ RKY L  +S+   +  SF +RLL   ++L
Sbjct: 1   MGSNKEPKID-YLDILKEQFNALQSEHLELRRKYELECSSS---TPDSFPSRLLSLTSSL 56

Query: 329 YGRETYSDIKIKLQN---KSMPGHKFVLNARSDDWNEEALKDFDELDWTSLPDDVG---- 487
             +  +SD+  K      KS+P HK+VL AR+D W  E     DE     + DDV     
Sbjct: 57  LEKPRFSDVTFKFAGNSLKSVPAHKYVLAARTDFWKFE--NGGDEKSEIQISDDVDFEAF 114

Query: 488 SALLKWLYTDVVDLSRGDSFALQLMKSAAGFKLYGLVNKCEQALIASVGVRSCVKFY 658
              ++W+YTD +DL   D   L++ ++A  F+L  L N C Q L A + V +C+K Y
Sbjct: 115 HVAIRWIYTDEIDLKMEDEKLLKVCETATSFRLEQLKNVCVQQLGARLHVDNCIKIY 171


>Z68320-4|CAA92705.4|  448|Caenorhabditis elegans Hypothetical
           protein W07A12.4 protein.
          Length = 448

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 20/91 (21%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
 Frame = +2

Query: 308 LMTVATLYGRETYSDIKIKLQNKSMPGHKFVLNARSDDWNEEALKDF--DELDWTSLPDD 481
           L  +A  Y    +SD+ +K+  +S P H+ +L+  SD ++    + +  D+ D   + D+
Sbjct: 32  LCDMAKFYNNAQFSDVNMKVGEESYPAHRLILSKSSDVFDRMMSQKWNGDKFDLELVEDE 91

Query: 482 V----GSALLKWLYTDVVDLSRGDSFALQLM 562
           +     +  L+++Y++ V L + +   L ++
Sbjct: 92  LCQKAFAPFLRFMYSNHVVLHKDNCLPLLVL 122


>AL008881-4|CAH10844.2|  448|Caenorhabditis elegans Hypothetical
           protein W07A12.4 protein.
          Length = 448

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 20/91 (21%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
 Frame = +2

Query: 308 LMTVATLYGRETYSDIKIKLQNKSMPGHKFVLNARSDDWNEEALKDF--DELDWTSLPDD 481
           L  +A  Y    +SD+ +K+  +S P H+ +L+  SD ++    + +  D+ D   + D+
Sbjct: 32  LCDMAKFYNNAQFSDVNMKVGEESYPAHRLILSKSSDVFDRMMSQKWNGDKFDLELVEDE 91

Query: 482 V----GSALLKWLYTDVVDLSRGDSFALQLM 562
           +     +  L+++Y++ V L + +   L ++
Sbjct: 92  LCQKAFAPFLRFMYSNHVVLHKDNCLPLLVL 122


>Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical
           protein ZK858.4 protein.
          Length = 395

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
 Frame = +2

Query: 287 TSFVARLLMTVATLYGRETYSDIKIKLQNKSMPGHKFVLNARSDDWNEEAL-KDFDE--- 454
           T+   +L+     L+ +E   D  I +  K +  HK VL ARS  +N     +D DE   
Sbjct: 181 TNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPVFNAMLTHQDTDEAKS 240

Query: 455 --LDWTSLPDDVGSALLKWLYTDVVDLSRGDSFALQLMKSAAGFKLYGLVNKCEQALIAS 628
             +    +  DV   ++ ++Y    +    D  A  L+ +A  ++L  L + CE+ L+ +
Sbjct: 241 SMMYINDMDYDVIYEMVYYIYCGRCNKDITD-MATALLIAADKYRLEELKSHCEKYLVEN 299

Query: 629 VGVRS 643
           + + +
Sbjct: 300 INIEN 304


>U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.
          Length = 395

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
 Frame = +2

Query: 287 TSFVARLLMTVATLYGRETYSDIKIKLQNKSMPGHKFVLNARSDDWNEEAL-KDFDE--- 454
           T+   +L+     L+ +E   D  I +  K +  HK VL ARS  +N     +D DE   
Sbjct: 181 TNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPVFNAMLTHQDTDEAKS 240

Query: 455 --LDWTSLPDDVGSALLKWLYTDVVDLSRGDSFALQLMKSAAGFKLYGLVNKCEQALIAS 628
             +    +  DV   ++ ++Y    +    D  A  L+ +A  ++L  L + CE+ L+ +
Sbjct: 241 SMMYINDMDYDVIYEMVYYIYCGRCNKDITD-MATALLIAADKYRLEELKSHCEKYLVEN 299

Query: 629 VGVRS 643
           + + +
Sbjct: 300 INIEN 304


>AL110479-9|CAB60315.3|  583|Caenorhabditis elegans Hypothetical
           protein Y105C5B.11 protein.
          Length = 583

 Score = 31.1 bits (67), Expect = 0.73
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 97  LQSAKSQAVSRCCKNFRHGFQR-GDEATTTFDVAKGRVWETAESLC 231
           +Q  + +   +C ++   GF R G+E   TFDV      E  ES C
Sbjct: 483 IQEFQDKVAPKCAESVSDGFLRDGEELIATFDVTSSNATEEFESEC 528


>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
           protein Y47G6A.17 protein.
          Length = 1736

 Score = 30.7 bits (66), Expect = 0.96
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 152 ASSEVTKLQQHLTLLKEEYGKLQSHC 229
           A  E+T+L++ +    E+ GKLQ HC
Sbjct: 474 AREEITRLEKQMKFRDEQIGKLQQHC 499


>U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical
           protein C07D10.2a protein.
          Length = 390

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
 Frame = +2

Query: 326 LYGRETYSDIKIKLQNKSMPGHKFVLNARSDDW-----NEEALKDFDELDWTSLPDDVGS 490
           LY    ++D  + ++ + +  HK +L ARS  +        A           +  +V  
Sbjct: 196 LYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMMEPHTAEAQNSRAILRDIDYEVVQ 255

Query: 491 ALLKWLYTDVVDLSRGDSFALQLMKSAAGFKLYGLVNKCEQAL 619
           A+L ++YT       G+  AL ++ +A  F L GL N  E A+
Sbjct: 256 AILYYIYTGTCTNMGGN--ALDILAAAERFALPGLKNIAEVAM 296


>U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical
           protein C07D10.2b protein.
          Length = 397

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
 Frame = +2

Query: 326 LYGRETYSDIKIKLQNKSMPGHKFVLNARSDDW-----NEEALKDFDELDWTSLPDDVGS 490
           LY    ++D  + ++ + +  HK +L ARS  +        A           +  +V  
Sbjct: 203 LYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMMEPHTAEAQNSRAILRDIDYEVVQ 262

Query: 491 ALLKWLYTDVVDLSRGDSFALQLMKSAAGFKLYGLVNKCEQAL 619
           A+L ++YT       G+  AL ++ +A  F L GL N  E A+
Sbjct: 263 AILYYIYTGTCTNMGGN--ALDILAAAERFALPGLKNIAEVAM 303


>Z54238-8|CAA90998.3|  459|Caenorhabditis elegans Hypothetical
           protein T28C6.7 protein.
          Length = 459

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = +2

Query: 152 ASSEVTKLQQHLTLLKEEYGKLQSHCAEVERKYTLAAASAGDLSETSFVARLLMTVATLY 331
           ASSE   L+Q +  L     K+++       KYT  A +AG  ++ +  AR+     TL 
Sbjct: 212 ASSENALLRQQVIELNSSVEKMKADYESEILKYTKEAKTAGLKAKVAATARIKELETTLE 271

Query: 332 G-RETYSDIKIKLQNK 376
                Y D + +LQ +
Sbjct: 272 DINGKYEDERDRLQEE 287


>AC024211-6|AAF36067.2| 1454|Caenorhabditis elegans Hypothetical
           protein Y76B12C.7 protein.
          Length = 1454

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 25/93 (26%), Positives = 40/93 (43%)
 Frame = +2

Query: 299 ARLLMTVATLYGRETYSDIKIKLQNKSMPGHKFVLNARSDDWNEEALKDFDELDWTSLPD 478
           ++LL     L G   +    +   N+++P    VLN+  D + +  LKD   L  T    
Sbjct: 252 SQLLPIPKPLGGALVFGSNTVVYLNQAVPPCGLVLNSCYDGFTKFPLKDLKHLKMTL--- 308

Query: 479 DVGSALLKWLYTDVVDLSRGDSFALQLMKSAAG 577
           D  +++        V    GD F L+LM S+ G
Sbjct: 309 DCSTSVYMEDGRIAVGSRDGDLFLLRLMTSSGG 341


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,308,964
Number of Sequences: 27780
Number of extensions: 242818
Number of successful extensions: 715
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)