Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16l14
         (662 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          30   0.023
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   4.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   6.0  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   7.9  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 29.9 bits (64), Expect = 0.023
 Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
 Frame = +2

Query: 338 ETYSDIKIKLQNKSMPGHKFVLNARSDDWNEEALKDFDELDWTSLPDDVG----SALLKW 505
           E + D+ +     S+  HK VL+A S  + +  L +  +     +P DV       ++++
Sbjct: 33  EAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEF 92

Query: 506 LYTDVVDLSRGDSFALQLMKSAAGFKLYGL 595
           +Y   +D+S+ +     L+K+A   K+ GL
Sbjct: 93  VYRGEIDVSQAE--LQSLLKTADQLKIKGL 120


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +3

Query: 84  LIQLSAI-SQKSSGFQVLQKLPSWLP 158
           +++L  + S KSSG++ L+ +  W P
Sbjct: 439 VVELQPVKSSKSSGWRKLRNIVHWTP 464


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 16/71 (22%), Positives = 31/71 (43%)
 Frame = +2

Query: 89  PTFCNQPKVKRFPGVAKTSVMASSEVTKLQQHLTLLKEEYGKLQSHCAEVERKYTLAAAS 268
           P   N+  +      A  +   SSE ++ ++  T L+ E  +   HC + +  Y  AA+ 
Sbjct: 737 PRVENRSAIVHSEASANANSSTSSEESREEKATTSLEAEKREKSEHCEKGKEYY--AASF 794

Query: 269 AGDLSETSFVA 301
             D+  +  +A
Sbjct: 795 HTDIGNSQSLA 805


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -1

Query: 506 AISIGLTLHHLVE 468
           A+  GL+LHH+++
Sbjct: 32  AVVFGLSLHHIID 44


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,976
Number of Sequences: 438
Number of extensions: 2789
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)