Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16l05
         (284 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   3.0  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              19   9.0  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    19   9.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   9.0  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = +3

Query: 114 GQNKEEP*ECQVQGSMLKVPVHPGHH 191
           G+  E+P  C + G    VP     H
Sbjct: 85  GKEGEDPYRCNICGKTFAVPARLTRH 110


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +1

Query: 103 DXKSVKIKKNPENVKFKVRCSRFLYTLVITD 195
           D    KI    ENV+  + C+   ++ V  D
Sbjct: 46  DVNDGKINIEDENVQLYIECAMKKFSFVDKD 76


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 251 SLTWRPGGKLCLSXS 207
           ++TW  GGK+ L+ S
Sbjct: 838 TVTWLKGGKIELNPS 852


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 251 SLTWRPGGKLCLSXS 207
           ++TW  GGK+ L+ S
Sbjct: 834 TVTWLKGGKIELNPS 848


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,873
Number of Sequences: 438
Number of extensions: 777
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5619645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)