Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16k24
(657 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 203 8e-53
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 190 1e-48
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 143 1e-34
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 142 2e-34
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 142 2e-34
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 142 2e-34
12_02_1282 + 27528159-27529148,27529549-27529614 140 9e-34
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 139 2e-33
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 138 3e-33
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 138 3e-33
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 137 6e-33
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 136 2e-32
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 113 9e-26
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 78 7e-15
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 58 5e-09
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 48 9e-06
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 39 0.004
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 38 0.005
07_03_0401 + 17724103-17724463,17724554-17724683,17725068-177250... 34 0.11
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 33 0.26
07_03_0143 - 14315097-14315130,14315594-14315662,14316152-143162... 31 1.1
06_03_0745 + 24109406-24109921 29 4.3
08_02_0850 + 21862110-21862394,21862555-21862723,21862901-218629... 28 5.7
05_03_0359 - 12929240-12929376,12931379-12933497,12933594-129337... 27 9.9
02_05_0888 - 32517876-32518087,32518320-32518694,32519551-325196... 27 9.9
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 203 bits (496), Expect = 8e-53
Identities = 100/187 (53%), Positives = 127/187 (67%), Gaps = 12/187 (6%)
Frame = +1
Query: 133 PACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKET--------AKVGDQSTRRMTKAVED 288
PA VID GTGYTK+GFAGN EP FI P+ +A+ +T G+ + + D
Sbjct: 7 PAVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMAD 66
Query: 289 LDFFIGDEAF----EATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMT 456
LDFFIG++A + Y++ YP+ +G VE+WD MER+ +QC+F YLR +PEDH+FL+T
Sbjct: 67 LDFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLLT 126
Query: 457 EPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDG 636
E PL PE REY EIMFE+FNVPGLYIA Q VLALAA + T+ + TG+VVD GDG
Sbjct: 127 ESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGY---TTTKCEMTGVVVDVGDG 183
Query: 637 VTHIVPV 657
THIVPV
Sbjct: 184 ATHIVPV 190
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 190 bits (462), Expect = 1e-48
Identities = 97/198 (48%), Positives = 134/198 (67%), Gaps = 23/198 (11%)
Frame = +1
Query: 133 PACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKET-------AKVGDQSTRRMTKAVEDL 291
PA VID GTGY+KLGF+GN EP F IP+ +A+ E+ + + + DL
Sbjct: 7 PAVVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADL 66
Query: 292 DFFIGDEA---FEATG-YSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTE 459
DFFIGDEA F+++G Y+ K+P+ HG V+DWD MER+ +QC+F YLR PE+H+FL+T+
Sbjct: 67 DFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLTD 126
Query: 460 PPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASW---KSRTSAERT--------- 603
P++TPE+RE EIMFE+FNVPGLYI+VQ+VL+L+A + KS + +
Sbjct: 127 SPVSTPESRECAGEIMFETFNVPGLYISVQSVLSLSAGYAFLKSISDEDSVSVFCFAIPL 186
Query: 604 FTGIVVDSGDGVTHIVPV 657
+TG+VVD GDG H+VPV
Sbjct: 187 YTGVVVDIGDGAPHVVPV 204
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 143 bits (347), Expect = 1e-34
Identities = 78/180 (43%), Positives = 106/180 (58%), Gaps = 1/180 (0%)
Frame = +1
Query: 121 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFF 300
G+ + V D GTG K GFAG+ P+ + PS VG + + D +
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAY 55
Query: 301 IGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTP 477
+GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPALLTEAPLNPK 115
Query: 478 ENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPV 657
NRE + +IMFESFNVP +Y+A+QAVL+L AS ++ TGIV+DSGDGV+H VP+
Sbjct: 116 ANREKMTQIMFESFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPI 167
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 142 bits (345), Expect = 2e-34
Identities = 77/180 (42%), Positives = 106/180 (58%), Gaps = 1/180 (0%)
Frame = +1
Query: 121 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFF 300
G+ + V D GTG K GFAG+ P+ + PS VG + + D +
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAY 55
Query: 301 IGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTP 477
+GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 115
Query: 478 ENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPV 657
NRE + +IMFE+FNVP +Y+A+QAVL+L AS ++ TGIV+DSGDGV+H VP+
Sbjct: 116 ANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPI 167
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 142 bits (345), Expect = 2e-34
Identities = 77/180 (42%), Positives = 106/180 (58%), Gaps = 1/180 (0%)
Frame = +1
Query: 121 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFF 300
G+ + V D GTG K GFAG+ P+ + PS VG + + D +
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAY 55
Query: 301 IGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTP 477
+GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 115
Query: 478 ENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPV 657
NRE + +IMFE+FNVP +Y+A+QAVL+L AS ++ TGIV+DSGDGV+H VP+
Sbjct: 116 ANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPI 167
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 142 bits (345), Expect = 2e-34
Identities = 77/180 (42%), Positives = 106/180 (58%), Gaps = 1/180 (0%)
Frame = +1
Query: 121 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFF 300
G+ + V D GTG K GFAG+ P+ + PS VG + + D +
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAY 55
Query: 301 IGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTP 477
+GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 115
Query: 478 ENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPV 657
NRE + +IMFE+FNVP +Y+A+QAVL+L AS ++ TGIV+DSGDGV+H VP+
Sbjct: 116 ANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPI 167
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 140 bits (339), Expect = 9e-34
Identities = 76/179 (42%), Positives = 104/179 (58%), Gaps = 1/179 (0%)
Frame = +1
Query: 124 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 303
D + V D GTG K GFAG+ P+ + PS VG + + D ++
Sbjct: 5 DDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYV 56
Query: 304 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 480
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 57 GDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 116
Query: 481 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPV 657
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DSGDGV+H VP+
Sbjct: 117 NREKMTQIMFETFNAPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPI 167
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 139 bits (337), Expect = 2e-33
Identities = 76/173 (43%), Positives = 102/173 (58%), Gaps = 1/173 (0%)
Frame = +1
Query: 142 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 321
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 10 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQA 61
Query: 322 ATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLA 498
G ++KYP+ HGIV +WD ME+ + LR PEDH L+TE PLN NRE +
Sbjct: 62 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEDHPVLLTEAPLNPKANREKMT 121
Query: 499 EIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPV 657
+IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DSGDGV+H VP+
Sbjct: 122 QIMFETFNCPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPI 166
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 138 bits (335), Expect = 3e-33
Identities = 75/173 (43%), Positives = 103/173 (59%), Gaps = 1/173 (0%)
Frame = +1
Query: 142 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 321
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 62
Query: 322 ATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLA 498
G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN NRE +
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 499 EIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPV 657
+IMFE+F+VP +Y+A+QAVL+L AS ++ TGIV+DSGDGV+H VP+
Sbjct: 123 QIMFETFSVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPI 167
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 138 bits (335), Expect = 3e-33
Identities = 75/173 (43%), Positives = 102/173 (58%), Gaps = 1/173 (0%)
Frame = +1
Query: 142 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 321
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 62
Query: 322 ATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLA 498
G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN NRE +
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 499 EIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPV 657
+IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DSGDGV+H VP+
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPI 167
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 137 bits (332), Expect = 6e-33
Identities = 74/173 (42%), Positives = 102/173 (58%), Gaps = 1/173 (0%)
Frame = +1
Query: 142 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 321
V D GTG K GFAG+ P+ + PS VG + + D ++GDEA
Sbjct: 10 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 61
Query: 322 ATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLA 498
G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE P+N NRE +
Sbjct: 62 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKANREKMT 121
Query: 499 EIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPV 657
+IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DSGDGV+H VP+
Sbjct: 122 QIMFETFNCPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPI 166
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 136 bits (328), Expect = 2e-32
Identities = 75/180 (41%), Positives = 102/180 (56%), Gaps = 1/180 (0%)
Frame = +1
Query: 121 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFF 300
G+ + V D GTG K GFAG+ P+ + PS VG + + D +
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAY 55
Query: 301 IGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTP 477
+GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPK 115
Query: 478 ENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPV 657
NRE + +IMFE+FN P +Y+A+QAVL+L AS + IV+DSGDGVTH VP+
Sbjct: 116 ANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-----------IVLDSGDGVTHTVPI 164
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 113 bits (273), Expect = 9e-26
Identities = 65/173 (37%), Positives = 90/173 (52%), Gaps = 1/173 (0%)
Frame = +1
Query: 142 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 321
V D GTGY K GFAG P + P + + +T D +G +
Sbjct: 8 VCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELT------DIVVGAACAD 61
Query: 322 ATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLA 498
V YPV +GIV+ WD M + + L+ +P + L+T+PPLN +NRE +
Sbjct: 62 LRHQLDVSYPVTNGIVQSWDDMGHIWDHAFYSELKVDPSECKILLTDPPLNPVKNREKMI 121
Query: 499 EIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPV 657
E MFE +N G++I VQAVL+L A+ TG+V+DSGDGVTH+VPV
Sbjct: 122 ETMFEKYNFAGVFIQVQAVLSL--------YAQGLLTGLVIDSGDGVTHVVPV 166
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 77.8 bits (183), Expect = 7e-15
Identities = 46/129 (35%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Frame = +1
Query: 274 KAVEDLDFFIGDEA-FEATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFL 450
KA ++G E F V P++ G V DWD+++ + L PE+H L
Sbjct: 112 KAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLINPEEHPML 171
Query: 451 MTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSG 630
+ EP NT + RE AE+MFE + VP L++A AVL AS ++ T +VVDSG
Sbjct: 172 IAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRA--------TSLVVDSG 223
Query: 631 DGVTHIVPV 657
G T + V
Sbjct: 224 GGSTVVAAV 232
Score = 34.7 bits (76), Expect = 0.066
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 121 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPS 216
GD + A VIDVG+ K G+AG+ P+ + PS
Sbjct: 4 GDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPS 35
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 58.4 bits (135), Expect = 5e-09
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 3/175 (1%)
Frame = +1
Query: 142 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAK---VGDQSTRRMTKAVEDLDFFIGDE 312
V+D G G K GF G+ P ++P+ +A +K V DQ +D+D
Sbjct: 9 VLDNGGGLLKAGFGGDMNPTAVVPNCMAKPPGSKKWLVADQ------LQAQDVD------ 56
Query: 313 AFEATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREY 492
TG +++ P+ G + + ++ E+ + L+ +P + L+ EP N P +
Sbjct: 57 ---VTGMTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHA 113
Query: 493 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPV 657
E++FE L +A L + S R +VVD G TH PV
Sbjct: 114 TDELVFEELGFKSLCVADAPSLVHLYEASRQPSLFRAQCSLVVDCGFSFTHASPV 168
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 47.6 bits (108), Expect = 9e-06
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Frame = +1
Query: 142 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 321
VID G ++G+AG EP+ + + G+ T V D D + + F+
Sbjct: 23 VIDNGASTFRIGWAGEAEPRVAFRNIVQRPRHRSSGETVT-----VVGDTDPALM-KYFD 76
Query: 322 ATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPE-DHHFLMTEPPLNTPENREYLA 498
T +++ P +V ++ ME YI F L A E H LMTE N +R ++
Sbjct: 77 CTRSAIRSPFDDDVVYQFEYME-YILDFGFDRLGATSEVGHPILMTECECNPSFSRARMS 135
Query: 499 EIMFESFNVPGL 534
E++FE++ VP +
Sbjct: 136 ELLFETYGVPSI 147
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 346 PVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENRE 489
P++ G DWD+++ + L PE+H L+ EP NT + RE
Sbjct: 92 PMKDGTFIDWDIVDNIWNHAFRQRLLINPEEHPMLIVEPSTNTGQQRE 139
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +1
Query: 484 REYLAEIMFESFNVPGLYIAVQAVLALAA 570
RE LA++MFE FNV G Y + QAVL+L A
Sbjct: 159 REQLAQLMFEKFNVSGFYDSEQAVLSLYA 187
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/85 (27%), Positives = 36/85 (42%)
Frame = +1
Query: 226 IKETAKVGDQSTRRMTKAVEDLDFFIGDEAFEATGYSVKYPVRHGIVEDWDLMERYIEQC 405
+K + DQS + + L+ G A V PV G V+DWD ME +
Sbjct: 13 LKAGIALPDQSPSLVMPSKMKLEVEDGQMGDGAVVEEVVQPVVRGFVKDWDAMEDLLNYV 72
Query: 406 VFKYLRAEPEDHHFLMTEPPLNTPE 480
++ + E D ++ PL TP+
Sbjct: 73 LYSNIGWEIGDEGQILFTEPLFTPK 97
>07_03_0401 +
17724103-17724463,17724554-17724683,17725068-17725083,
17725130-17725203,17725693-17725761,17726224-17726257
Length = 227
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 346 PVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENRE 489
P++ G DWD+++ Y PE+H L+ EP NT + RE
Sbjct: 173 PMKDGTFIDWDIVDNIWNHAFSFY----PEEHPMLIVEPSTNTGQQRE 216
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 32.7 bits (71), Expect = 0.26
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = +1
Query: 484 REYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPV 657
R+ L ++F+ NVP + QAVLAL A A+RT +GIVV+ G T IVP+
Sbjct: 225 RDTLYSVLFD-MNVPAVCSVDQAVLALYA-------AKRT-SGIVVNIGFNATSIVPI 273
>07_03_0143 -
14315097-14315130,14315594-14315662,14316152-14316225,
14316316-14316331,14316716-14316845,14316936-14316999
Length = 128
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 346 PVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENRE 489
P++ G DWD+++ Y E+H L+ EP NT + RE
Sbjct: 74 PMKDGTFIDWDIVDNIWNHAFSFYA----EEHPMLIVEPSTNTGQQRE 117
>06_03_0745 + 24109406-24109921
Length = 171
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 111 NKNGRPFTSLCYRCRHRVY*TGF-CR*QGTTVYYSINHSDKRNCK 242
N GR + C CR RV TGF CR G +SDK +C+
Sbjct: 102 NPKGREGPNRCSTCRKRVGLTGFNCR-CGNLYCAMHRYSDKHDCQ 145
>08_02_0850 +
21862110-21862394,21862555-21862723,21862901-21862965,
21863632-21863905,21863998-21864145,21864237-21864346,
21864440-21864495,21864568-21864624,21864733-21864876,
21865304-21865351
Length = 451
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/60 (21%), Positives = 26/60 (43%)
Frame = +1
Query: 316 FEATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYL 495
+ G + P+ H + E W + E Y + + +Y +P+ + L P R+Y+
Sbjct: 146 YTGKGCGMPLPIAH-VEESWQMAEFYSNKVLVEYKSKDPDHVEWAKALKELFVPSLRDYV 204
>05_03_0359 -
12929240-12929376,12931379-12933497,12933594-12933773,
12933905-12934118,12934199-12934551,12934642-12934864,
12934953-12935230,12935456-12935725,12935817-12935939,
12936025-12936102,12936351-12936527,12936597-12936686,
12937010-12937120,12937397-12937585,12937667-12937858,
12937990-12938076,12938153-12938257,12938340-12938396,
12938471-12938545,12938647-12938763,12938876-12939000,
12939082-12939121,12939241-12939291,12939382-12939569,
12939808-12939901,12939976-12940149,12940242-12940337,
12940597-12940689,12940794-12940955,12941034-12941240,
12941356-12941728,12942379-12942436,12943096-12943171,
12943874-12943941,12944321-12944642
Length = 2433
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 211 PSTIAIKETAKVGDQSTRRMTKAV 282
P T+A +ET K +Q+ RR+ KAV
Sbjct: 491 PVTVAPRETVKELEQAARRLAKAV 514
>02_05_0888 - 32517876-32518087,32518320-32518694,32519551-32519638,
32520145-32520384,32521033-32521149,32521213-32521606,
32521752-32521998,32522086-32522315,32522768-32522823,
32522903-32523094,32523274-32523376,32523478-32523544,
32524312-32525154,32525547-32525670,32525965-32526213,
32526354-32526443,32526530-32526649,32526664-32526738,
32527001-32527147,32527255-32527365,32527446-32527667,
32527777-32527896,32527971-32528270,32528355-32528480,
32529246-32529360,32529556-32530019,32530119-32530253,
32530684-32530788,32530876-32531053,32531143-32531864
Length = 2188
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 345 SCAPRYRRRLGFNGKVH 395
+C P +RR GF G VH
Sbjct: 952 TCEPSFRREFGFGGSVH 968
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,130,521
Number of Sequences: 37544
Number of extensions: 350856
Number of successful extensions: 928
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -