Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16k13
         (657 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   2.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.6  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   2.6  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   4.5  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   5.9  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/49 (24%), Positives = 20/49 (40%)
 Frame = +2

Query: 305 WTQELVWMVANDLDYEKSAAVPLTQRYPFLEFSICVHPVMKKKFTEENS 451
           WT  +  M  + +D      +       F EF++    +  KK  EEN+
Sbjct: 371 WTDGIFGMALSPVDIHDDRTLFFHPMSSFREFAVSTSILGDKKTAEENT 419


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -2

Query: 131 ALDPHCLFLKEHCYFLNPSQKISIDFLVFYLNLVNKKA 18
           + D  C  L E C+   PS++  +  +V  L  + +KA
Sbjct: 826 SFDDECWRLMEQCWSGEPSKRPLLGAIVPVLESIQQKA 863


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -2

Query: 131 ALDPHCLFLKEHCYFLNPSQKISIDFLVFYLNLVNKKA 18
           + D  C  L E C+   PS++  +  +V  L  + +KA
Sbjct: 864 SFDDECWRLMEQCWSGEPSKRPLLGAIVPVLESIQQKA 901


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 65  KSFAMDLKNNNVPLEINNVDQELAN 139
           K+F   L+N+ VP  +N +  ++ N
Sbjct: 76  KTFVTILRNDGVPSSLNVISNKIGN 100


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 320 VWMVANDLDYEKSAAVPL 373
           +W++ + LD+E  A+ PL
Sbjct: 679 IWLLGSRLDWEDHASSPL 696


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = +2

Query: 206 FPQKYTEEASKIYNMPLRDSDVFVASYPRSGTTWTQELVW 325
           FP+  T  A+ +     RD+      Y + G +  Q+  W
Sbjct: 586 FPRSITRNATALIKKLCRDNPAERLGYQKGGISEIQKHKW 625


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,744
Number of Sequences: 438
Number of extensions: 4027
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)