Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16k10
         (703 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF045642-6|AAC02590.1|  632|Caenorhabditis elegans Hypothetical ...    31   1.1  
U61944-4|AAB03120.1|  891|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z75714-8|CAB00061.1|  471|Caenorhabditis elegans Hypothetical pr...    28   5.6  
U58735-3|AAC48143.1|  337|Caenorhabditis elegans Hypothetical pr...    28   5.6  
U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AL117206-1|CAB60446.1|  644|Caenorhabditis elegans Hypothetical ...    28   7.4  
Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>AF045642-6|AAC02590.1|  632|Caenorhabditis elegans Hypothetical
           protein C17H12.12 protein.
          Length = 632

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = -1

Query: 379 GL*SSQLFDDFI*HLFPKEVREHTLTYTFCMGRSFWYLIIF 257
           G+  S +FD +  H+F + +R+H   +   + +SF ++I F
Sbjct: 259 GIIQSLVFDRYTSHVFVERIRQHAYMFVTDLHQSFKFMIFF 299


>U61944-4|AAB03120.1|  891|Caenorhabditis elegans Hypothetical
           protein T12E12.2 protein.
          Length = 891

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 20/63 (31%), Positives = 26/63 (41%)
 Frame = +2

Query: 392 CTEYDANYIKDEFEPRNLEVAADKNMHLKYPLYGTGSSAITFYSETAKKTGPGEILEKFR 571
           CT+     ++   E    E    +    KYPL  T S  +T +S       P   L KFR
Sbjct: 294 CTQETKKALQKAIESAREECEEIEKTIKKYPLQVTSSRVVTGFS-------PALTLRKFR 346

Query: 572 RCQ 580
           RCQ
Sbjct: 347 RCQ 349


>Z75714-8|CAB00061.1|  471|Caenorhabditis elegans Hypothetical
           protein ZC434.7a protein.
          Length = 471

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +3

Query: 216 KMDEQFRELAAKCGKIIKYQKDLPIQKVYVSVCSRTSFGNKC 341
           + DE F+++A  C   +  + +L ++K Y+S         KC
Sbjct: 230 EFDEIFKQVAEACSAKVSVKSELDVKKTYISEKEGKILKEKC 271


>U58735-3|AAC48143.1|  337|Caenorhabditis elegans Hypothetical
           protein F20B4.2 protein.
          Length = 337

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = +3

Query: 51  RLLRMKVFKPIYLNQKMKIVNLESDHWKGLSSTLNIP*SHLLMERERTSVD 203
           R  R K  +  YL+   ++++L++  ++GLS +LN P    +   + T  D
Sbjct: 129 RTARFKANEKCYLHSVCQLISLKNPTFQGLSHSLNSPGDKKVAAEKHTCED 179


>U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical
           protein D2096.8 protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +2

Query: 242 GSEMRENYQIPKRPPHTEGIRKRMLTDFFWEQMLDEVIEELATSQPVSEYCTEYDANYIK 421
           G ++ E Y+  +  P  +GI+   LT      ++ E IEE     P+  Y T+      K
Sbjct: 94  GDQLAELYKAAEADPSAKGIKDFWLTALRTHDLVAEAIEE--HDVPILSYLTDVTTAASK 151

Query: 422 D 424
           D
Sbjct: 152 D 152


>AL117206-1|CAB60446.1|  644|Caenorhabditis elegans Hypothetical
           protein Y67A10A.1 protein.
          Length = 644

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 299 YLLYGEVFLVFDNFPAFRCQFPELFVHLVISRVD 198
           Y  Y +   + D FP F   F  LF+H  ++R D
Sbjct: 524 YEKYVKKLYILDAFPEFHENFLNLFLHYAVTRPD 557


>Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical protein
            D2085.1 protein.
          Length = 2198

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 546  RVKS*KSSEDVSISLNQWKKDSTMVGFCNFCS 641
            R K  +  E + IS  QWKK   M    NFC+
Sbjct: 1050 RFKFSRKLESLKISQPQWKKSENMEDAKNFCA 1081


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,702,993
Number of Sequences: 27780
Number of extensions: 368226
Number of successful extensions: 1163
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)