Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16j19
         (672 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ402957-1|ABD77290.1|  305|Homo sapiens mitochondrial malate de...   100   9e-21
CR536548-1|CAG38785.1|  338|Homo sapiens MDH2 protein.                100   9e-21
BC001917-1|AAH01917.1|  338|Homo sapiens malate dehydrogenase 2,...   100   9e-21
AF047470-1|AAC03787.1|  338|Homo sapiens malate dehydrogenase pr...   100   9e-21
AC005077-1|AAS07425.1|  316|Homo sapiens unknown protein.             100   9e-21

>DQ402957-1|ABD77290.1|  305|Homo sapiens mitochondrial malate
           dehydrogenase 2, NAD protein.
          Length = 305

 Score = 99.5 bits (237), Expect = 9e-21
 Identities = 55/158 (34%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
 Frame = +2

Query: 206 KVTICGAAGATGXXXXXXXXXXXXXDEIALYDITATCGYGMELSHVDTKCKVSSFSGRHM 385
           KV + GA+G  G               + LYDI  T G   +LSH++TK  V  + G   
Sbjct: 5   KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAAVKGYLGPEQ 64

Query: 386 LCDALKDSKVVVIVA-------RNESDTFESSAPVLTELTLQICNTCPLAFTIVATEPVE 544
           L D LK   VVVI A           D F ++A ++  LT      CP A   V   PV 
Sbjct: 65  LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVIANPVN 124

Query: 545 AMVPLVAEIQRLRGVYNPRTLLGCVELNCVRANTVLAD 658
           + +P+ AE+ +  GVYNP  + G   L+ VRANT +A+
Sbjct: 125 STIPITAEVFKKHGVYNPNKIFGVTTLDIVRANTFVAE 162


>CR536548-1|CAG38785.1|  338|Homo sapiens MDH2 protein.
          Length = 338

 Score = 99.5 bits (237), Expect = 9e-21
 Identities = 55/158 (34%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
 Frame = +2

Query: 206 KVTICGAAGATGXXXXXXXXXXXXXDEIALYDITATCGYGMELSHVDTKCKVSSFSGRHM 385
           KV + GA+G  G               + LYDI  T G   +LSH++TK  V  + G   
Sbjct: 26  KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAAVKGYLGPEQ 85

Query: 386 LCDALKDSKVVVIVA-------RNESDTFESSAPVLTELTLQICNTCPLAFTIVATEPVE 544
           L D LK   VVVI A           D F ++A ++  LT      CP A   V   PV 
Sbjct: 86  LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVIANPVN 145

Query: 545 AMVPLVAEIQRLRGVYNPRTLLGCVELNCVRANTVLAD 658
           + +P+ AE+ +  GVYNP  + G   L+ VRANT +A+
Sbjct: 146 STIPITAEVFKKHGVYNPNKIFGVTTLDIVRANTFVAE 183


>BC001917-1|AAH01917.1|  338|Homo sapiens malate dehydrogenase 2,
           NAD (mitochondrial) protein.
          Length = 338

 Score = 99.5 bits (237), Expect = 9e-21
 Identities = 55/158 (34%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
 Frame = +2

Query: 206 KVTICGAAGATGXXXXXXXXXXXXXDEIALYDITATCGYGMELSHVDTKCKVSSFSGRHM 385
           KV + GA+G  G               + LYDI  T G   +LSH++TK  V  + G   
Sbjct: 26  KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAAVKGYLGPEQ 85

Query: 386 LCDALKDSKVVVIVA-------RNESDTFESSAPVLTELTLQICNTCPLAFTIVATEPVE 544
           L D LK   VVVI A           D F ++A ++  LT      CP A   V   PV 
Sbjct: 86  LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVIANPVN 145

Query: 545 AMVPLVAEIQRLRGVYNPRTLLGCVELNCVRANTVLAD 658
           + +P+ AE+ +  GVYNP  + G   L+ VRANT +A+
Sbjct: 146 STIPITAEVFKKHGVYNPNKIFGVTTLDIVRANTFVAE 183


>AF047470-1|AAC03787.1|  338|Homo sapiens malate dehydrogenase
           precursor protein.
          Length = 338

 Score = 99.5 bits (237), Expect = 9e-21
 Identities = 55/158 (34%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
 Frame = +2

Query: 206 KVTICGAAGATGXXXXXXXXXXXXXDEIALYDITATCGYGMELSHVDTKCKVSSFSGRHM 385
           KV + GA+G  G               + LYDI  T G   +LSH++TK  V  + G   
Sbjct: 26  KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAAVKGYLGPEQ 85

Query: 386 LCDALKDSKVVVIVA-------RNESDTFESSAPVLTELTLQICNTCPLAFTIVATEPVE 544
           L D LK   VVVI A           D F ++A ++  LT      CP A   V   PV 
Sbjct: 86  LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVIANPVN 145

Query: 545 AMVPLVAEIQRLRGVYNPRTLLGCVELNCVRANTVLAD 658
           + +P+ AE+ +  GVYNP  + G   L+ VRANT +A+
Sbjct: 146 STIPITAEVFKKHGVYNPNKIFGVTTLDIVRANTFVAE 183


>AC005077-1|AAS07425.1|  316|Homo sapiens unknown protein.
          Length = 316

 Score = 99.5 bits (237), Expect = 9e-21
 Identities = 55/158 (34%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
 Frame = +2

Query: 206 KVTICGAAGATGXXXXXXXXXXXXXDEIALYDITATCGYGMELSHVDTKCKVSSFSGRHM 385
           KV + GA+G  G               + LYDI  T G   +LSH++TK  V  + G   
Sbjct: 4   KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAAVKGYLGPEQ 63

Query: 386 LCDALKDSKVVVIVA-------RNESDTFESSAPVLTELTLQICNTCPLAFTIVATEPVE 544
           L D LK   VVVI A           D F ++A ++  LT      CP A   V   PV 
Sbjct: 64  LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVIANPVN 123

Query: 545 AMVPLVAEIQRLRGVYNPRTLLGCVELNCVRANTVLAD 658
           + +P+ AE+ +  GVYNP  + G   L+ VRANT +A+
Sbjct: 124 STIPITAEVFKKHGVYNPNKIFGVTTLDIVRANTFVAE 161


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,698,119
Number of Sequences: 237096
Number of extensions: 1633601
Number of successful extensions: 3139
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3134
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)