Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16j11
         (450 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   1.5  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   8.2  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   8.2  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   8.2  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -1

Query: 180 CISCFLKLHNPFQHFYPNAKESNVFRAYVCC 88
           C+  F    NP  +   + K  N F+  +CC
Sbjct: 315 CLYYFSTTINPILYNLMSIKYRNAFKQTICC 345


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 245 NVPMTPENLVN 213
           NV + PENLVN
Sbjct: 696 NVEVLPENLVN 706


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 326 KQCSYNCDS 352
           K+CSYN DS
Sbjct: 188 KKCSYNMDS 196


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +3

Query: 138 SVEMDCAISRNRRYNTSVATFRLVIIN*IFW 230
           SV+  CAI++  +Y       R+++   + W
Sbjct: 136 SVDRFCAITKPLKYGVKRTPRRMIVYVSLVW 166


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,125
Number of Sequences: 438
Number of extensions: 2875
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)