Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16j09
(660 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0766 - 22982606-22983288,22984352-22984706 38 0.009
03_02_0627 + 9951391-9951523,9951615-9951684,9951829-9951856,995... 34 0.12
01_01_0281 + 2327624-2327694,2327757-2327856 33 0.27
06_03_1409 - 29966787-29966990,29967150-29967413,29968098-299682... 32 0.35
02_03_0392 + 18485837-18485845,18486042-18486119,18486450-184865... 31 1.1
01_03_0260 - 14323503-14323603,14323751-14323990,14324212-143242... 31 1.1
03_05_0261 - 22470565-22470714,22472101-22474270,22474368-224745... 29 2.5
10_07_0124 - 13085820-13085997,13086235-13086362,13086475-130865... 29 3.3
06_01_0047 - 429838-429960,430413-430508,430589-430596,431088-43... 29 4.3
05_05_0163 + 22842955-22844371,22845519-22845592,22845913-22845948 28 5.7
03_02_0884 + 12160453-12160518,12160598-12160696,12163223-121633... 28 5.7
12_02_0145 - 14381089-14381154,14381351-14381494,14384678-14385547 28 7.6
08_01_1049 - 10627636-10628041,10630972-10631115,10631205-106318... 28 7.6
07_01_0024 + 159839-159923,160395-160442,160884-160895,161347-16... 28 7.6
02_05_0188 + 26587267-26587446,26587733-26587979,26588358-26588665 28 7.6
02_01_0699 - 5220896-5221345,5221403-5221504,5221694-5222343,522... 28 7.6
01_07_0167 - 41613834-41613842,41614060-41615056,41615456-416163... 28 7.6
01_03_0295 + 14750162-14750369,14751601-14752019 28 7.6
>12_02_0766 - 22982606-22983288,22984352-22984706
Length = 345
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +2
Query: 476 LHFVQRLDYATSGVLCMAKSRPAAASAGKAFEKRLTRKYYLAIVRGH 616
LH RLD TSG++ + K A KAF + +K YLA+ G+
Sbjct: 127 LHLANRLDRDTSGLMVITKCNKVAGKLVKAFTEHKVKKTYLALCIGY 173
>03_02_0627 +
9951391-9951523,9951615-9951684,9951829-9951856,
9952208-9952254,9952366-9952456,9952738-9952915,
9953626-9953713,9953788-9953869,9954195-9954270,
9954429-9954496,9954623-9954692,9955469-9955553,
9955671-9955764,9956289-9956372
Length = 397
Score = 33.9 bits (74), Expect = 0.12
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Frame = +2
Query: 329 VEILFENSDYLIVNKPYDMYINSDDENEKNTVAYQI---------ARCDSHLSTSSQPLH 481
+++L+E+ D + +NKP + + ++ TV Q+ + C S P+
Sbjct: 114 LDVLYEDDDMIALNKPSGLQVLPKGLFQQRTVLAQLQLKDWKMPSSFCSKRKDAQSHPVP 173
Query: 482 FVQRLDYATSGVLCMAKSRPAAASAGKAFEKRLT 583
V RL TSG+L AK++ A A F + T
Sbjct: 174 -VHRLGRGTSGLLLCAKTKLAKAQLAAYFAEGAT 206
>01_01_0281 + 2327624-2327694,2327757-2327856
Length = 56
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -2
Query: 587 SW-SISFRTLCQRWPQLADSWPCRARHSWR 501
SW + S R LC+R P SW A+HSWR
Sbjct: 4 SWVASSSRRLCRRRPSAEYSWKPAAKHSWR 33
>06_03_1409 -
29966787-29966990,29967150-29967413,29968098-29968241,
29969000-29969329
Length = 313
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 485 VQRLDYATSGVLCMAKSRPAAASAGKAFEKRLTRKYYLAIVRG 613
V RLD TSG+L +AK + A + F+ R+ Y+++ G
Sbjct: 231 VHRLDKGTSGLLVVAKDEHSHAQLAEQFKLHTIRRVYISLTCG 273
>02_03_0392 +
18485837-18485845,18486042-18486119,18486450-18486550,
18487000-18487087,18487753-18487897,18487968-18488050,
18488189-18488254,18488572-18488628,18489084-18489206,
18489645-18489696,18489830-18489944,18490018-18490147
Length = 348
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 485 VQRLDYATSGVLCMAKSRPAAASAGKAFEKRLTRKYYLAIVRG 613
V RLD SG+L AK+ A S + E L +K Y+A V G
Sbjct: 142 VHRLDRLVSGLLIFAKNADKAESFRQQIEASLLQKEYVAKVVG 184
>01_03_0260 -
14323503-14323603,14323751-14323990,14324212-14324275,
14324349-14324654,14324841-14325055,14325551-14325845,
14325965-14326129,14326324-14327352,14333553-14333814,
14334135-14334631,14338714-14340123
Length = 1527
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 533 SWPCRARHSWRSPIVGRNVKVAMTLTD 453
SWP R +W P++ R + A+ LTD
Sbjct: 273 SWPSRLMWAWMHPLLKRGYRAALDLTD 299
>03_05_0261 -
22470565-22470714,22472101-22474270,22474368-22474540,
22474763-22474924,22476420-22476560
Length = 931
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 345 SNRISTAMFFVDILNPRKLKLGAF-IFDDFSLIYLSRSEKHL 223
S R STA FVD+L P+K D F + +LS+ EK +
Sbjct: 373 SRRYSTAASFVDVLQPKKEVTSELPSLDKFLVKHLSKLEKEV 414
>10_07_0124 -
13085820-13085997,13086235-13086362,13086475-13086550,
13086726-13086803,13086985-13087064,13087411-13087480,
13087730-13087887,13088225-13088315,13088379-13088455,
13088612-13088686,13088798-13089071,13089911-13090041,
13090154-13090323,13090413-13090971,13091077-13091127
Length = 731
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -2
Query: 536 DSWPCRARHSWRSPIVGRNVKVAMTLTDENRNAL 435
D WP R+ +S + V N KVAM L D R L
Sbjct: 575 DKWPRRSTNSTGNSTVALNDKVAMLLDDVTRKFL 608
>06_01_0047 -
429838-429960,430413-430508,430589-430596,431088-431141,
431226-431274,431368-431466,431560-431639,431926-431989,
432082-432255,432342-432965,433046-433189,433262-433372,
433442-433498,433664-433798
Length = 605
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 269 KMNAPNFNFRGFRMSTK-NMAVEILFENSDYLI--VNKPYDMYINSDDENEKNT 421
K+ PN F ST N + +I + N D ++ +NK + IN DE EKN+
Sbjct: 474 KLPIPNEEFNPVNKSTNLNSSEQIKYINIDEIMKKLNKTGHVPINPPDETEKNS 527
>05_05_0163 + 22842955-22844371,22845519-22845592,22845913-22845948
Length = 508
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 65 YPVDKMPLEEVICVYLDRALQTTIQLFLSHYCPRISNYLLQVP 193
+PV ++PL+ +I ++TT + F S C ++ L ++P
Sbjct: 169 HPVPELPLDVIIPELARTTVETTYEHFASFVCNPLTGELFRLP 211
>03_02_0884 +
12160453-12160518,12160598-12160696,12163223-12163357,
12163841-12163891,12164070-12164693,12164779-12164952,
12165047-12165272,12165368-12165459,12165551-12165649,
12165743-12165791,12165878-12165931,12166235-12166290,
12166367-12166438,12166520-12166615,12167069-12167418,
12167508-12167679,12167777-12167875,12167959-12168090,
12168185-12168288,12168369-12168401,12168744-12168930,
12169016-12169024
Length = 992
Score = 28.3 bits (60), Expect = 5.7
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = +2
Query: 269 KMNAPNFNFRGFRMST-KNMAVEILFENSDYLI--VNKPYDMYINSDDENEKN---TVAY 430
K+ PN F ST N + EI N D ++ +NK + IN DE EKN T +Y
Sbjct: 500 KLPIPNEEFNPVNKSTILNSSEEIKHINIDEIMTKMNKTGHVPINPPDETEKNSALTDSY 559
Query: 431 QI 436
Q+
Sbjct: 560 QV 561
>12_02_0145 - 14381089-14381154,14381351-14381494,14384678-14385547
Length = 359
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 525 WPRVGQLRPALAKRSKRD*PGNTTW 599
WP VG+LR + R+ +D P +W
Sbjct: 123 WPLVGELRANVEVRTSKDGPRGASW 147
>08_01_1049 -
10627636-10628041,10630972-10631115,10631205-10631869,
10632709-10633110
Length = 538
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +2
Query: 446 DSHLSTSSQPLHFVQRLDYATSGVLCMAKSRPAAASAGKAFEKRLTRKYYLAIVRGH 616
D H ST QP + + VL + + AGK + RKY IV+G+
Sbjct: 344 DDHPSTEPQPKRRIIETSTPLTPVLRTVREQKIIVQAGKTSDGYRWRKYGQKIVKGN 400
>07_01_0024 +
159839-159923,160395-160442,160884-160895,161347-161427,
161530-161675,161918-161965,162054-162203,165647-165706,
165788-165859,165960-166409,166640-166839,167239-168236,
168676-168683,169057-169230,169341-169659,169748-169824,
169897-169966,170040-170111,170204-170418,170540-170665,
170751-171046,171133-171157,171163-171303,171400-171498,
171571-171702,171793-171912
Length = 1407
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 287 FNFRGFRMSTKNMAVEILFENSDYLIVNKPYDMYINSDDENEKNTVAYQIARCDSHLST 463
+ + +TK+ V++ EN DY+ +NSDDENE+ + + + DS ++T
Sbjct: 200 YQSKNSHFTTKDNEVDMATENDDYV--------ELNSDDENEQEGTSKMLQQ-DSQINT 249
>02_05_0188 + 26587267-26587446,26587733-26587979,26588358-26588665
Length = 244
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -2
Query: 620 QHVRGRSPGSISWSISFRTLCQRWPQLADSWPCRARHSW 504
Q + R PG +W +SF T P P AR W
Sbjct: 76 QRLEARPPGLTTWRVSFATSVHVLPHYYVVSPVGARQMW 114
>02_01_0699 - 5220896-5221345,5221403-5221504,5221694-5222343,
5222445-5222793,5223189-5223510,5223621-5224123,
5224486-5224578,5224708-5224759,5224837-5225129,
5225208-5225630,5225734-5226070,5226185-5226220,
5226272-5226589,5227465-5228450
Length = 1637
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 329 VEILFENSDYLIVNKPYDMYINSDDENEKN--TVAYQIARCDSHLS 460
+EI N Y V + D I +DDE E N T +Y I + +H++
Sbjct: 1402 IEIPDRNESYPEVERYSDNDIYNDDEEEANMETTSYAIIKLKNHMA 1447
>01_07_0167 -
41613834-41613842,41614060-41615056,41615456-41616336,
41616437-41616508,41616590-41616649,41616736-41616885,
41616974-41617021,41617107-41617181,41617266-41617411,
41617514-41617594,41617703-41617810,41618046-41618057,
41618137-41618148,41618499-41618546,41619021-41619105
Length = 927
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 287 FNFRGFRMSTKNMAVEILFENSDYLIVNKPYDMYINSDDENEKNTVAYQIARCDSHLST 463
+ + +TK+ V++ EN DY+ +NSDDENE+ + + + DS ++T
Sbjct: 265 YQSKNSHFTTKDNEVDMATENDDYV--------ELNSDDENEQEGTSNMLQQ-DSQINT 314
>01_03_0295 + 14750162-14750369,14751601-14752019
Length = 208
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -2
Query: 620 QHVRGRSPGSISWSISFRTLCQRWPQLADSWPCRARHSWRSPIVGRNVKVAMTLTD 453
+HV GR S++ L Q+W W CR + S ++G + +V + D
Sbjct: 125 RHVEGRDVDPFGHSLTGDHLRQKWWWWGQHWSCRLGIGFSSFLLGVHPRVGVGKED 180
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,885,903
Number of Sequences: 37544
Number of extensions: 370129
Number of successful extensions: 1165
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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