Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16i24
         (684 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82089-1|CAB05002.1|  983|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z81511-2|CAB04167.1|  983|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z70205-1|CAA94117.2|  460|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z70035-2|CAA93862.1|  440|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>Z82089-1|CAB05002.1|  983|Caenorhabditis elegans Hypothetical protein
            ZK270.1 protein.
          Length = 983

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +3

Query: 261  LNIKELFIKFLPFCFSLCHLYQLCFL**MYAILGLLNSI 377
            L + E+F+K +  C  LC+L+ L FL    AIL LL+SI
Sbjct: 905  LYMAEVFVKTMVLCVVLCNLHGLVFL---PAILILLDSI 940


>Z81511-2|CAB04167.1|  983|Caenorhabditis elegans Hypothetical protein
            ZK270.1 protein.
          Length = 983

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +3

Query: 261  LNIKELFIKFLPFCFSLCHLYQLCFL**MYAILGLLNSI 377
            L + E+F+K +  C  LC+L+ L FL    AIL LL+SI
Sbjct: 905  LYMAEVFVKTMVLCVVLCNLHGLVFL---PAILILLDSI 940


>Z70205-1|CAA94117.2|  460|Caenorhabditis elegans Hypothetical
           protein C11H1.2 protein.
          Length = 460

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +1

Query: 307 LFVIYTNYVFYNKCTRFWGC*IQFPL---ISVTGFFRVLITIAQLFVN 441
           L  +  NYV  +   R+W   I F L   I++T    +LIT+A+ FV+
Sbjct: 328 LIEVSVNYVGIDMDVRYWSQYISFFLVGVIAITSVRGLLITMAKFFVS 375


>Z70035-2|CAA93862.1|  440|Caenorhabditis elegans Hypothetical
           protein R09D1.2 protein.
          Length = 440

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 213 PDNTIHYDSL*VKTSFLNIKEL 278
           PD TIH++S   K SFL +++L
Sbjct: 120 PDGTIHFESRKAKESFLYLRKL 141


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,486,469
Number of Sequences: 27780
Number of extensions: 251493
Number of successful extensions: 538
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)