Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16i23
         (518 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40938-8|AAA81699.1|  123|Caenorhabditis elegans Hypothetical pr...    33   0.16 
AL033510-4|CAA22070.2|  343|Caenorhabditis elegans Hypothetical ...    29   2.0  
AF000263-15|AAG00018.1|  416|Caenorhabditis elegans Hypothetical...    28   3.5  
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z70783-11|CAA94860.2|  782|Caenorhabditis elegans Hypothetical p...    28   4.6  
U39995-3|AAF99995.2|  572|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AF067608-12|AAC17651.1|  458|Caenorhabditis elegans Hypothetical...    27   8.0  

>U40938-8|AAA81699.1|  123|Caenorhabditis elegans Hypothetical
           protein D1009.5 protein.
          Length = 123

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
 Frame = +2

Query: 158 PRKRFNVEKVEKMLNTILDSELAEVE-YSEKLIPELCMNLADSIRISVKEENYDRYRIIV 334
           P ++F  + V  M+  IL  +L  +  Y+      +  +++ SIR  +K     RY+ ++
Sbjct: 15  PGQKFRPKAVAGMIQEILGEKLGALTIYNVDEAELVSKDISASIRERLKGLQLPRYKYVI 74

Query: 335 SVSIGQRRQQSVHVFHSFLWDPERDGFAAATY 430
              I ++           +WD + DG+    Y
Sbjct: 75  QTMIAEQCGNGATTAVQCVWDEDCDGYLTQRY 106


>AL033510-4|CAA22070.2|  343|Caenorhabditis elegans Hypothetical
           protein Y40H7A.6 protein.
          Length = 343

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = -3

Query: 333 TMILYLS*FSSFTEIRILSARFIHSSGINFSLYS--TSANSESKIVLSI 193
           T I+ L+ F+S   +R+L    ++SSG  F L+S   S N    + L I
Sbjct: 37  TSIILLTFFASIYAVRVLKFHNVYSSGTQFLLFSLLISVNFNQMVYLVI 85


>AF000263-15|AAG00018.1|  416|Caenorhabditis elegans Hypothetical
           protein T08B2.11 protein.
          Length = 416

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 95  HSNKSKAD-KQVRIYQPTYQLNPRKRFNVEKVEKMLNTILDSEL 223
           H ++ KAD +++ +   + QLN   R   +K +K   T+LD E+
Sbjct: 176 HKSRKKADDRRIEVMPESSQLNVSARSLRKKTQKKPKTVLDLEI 219


>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
            B0365.7 protein.
          Length = 2769

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 16/73 (21%), Positives = 38/73 (52%)
 Frame = +2

Query: 26   TKMSRELRKISGISKTIQLFGRRHSNKSKADKQVRIYQPTYQLNPRKRFNVEKVEKMLNT 205
            T  ++E+ +I    + I+  GR   +   + K +++    Y  +P  R +++ +  +LNT
Sbjct: 2678 TARNKEIAEIETSLRAIE--GRMSESIDYSMKIIKMCYSLYLFDPFYRISLKSLVNVLNT 2735

Query: 206  ILDSELAEVEYSE 244
             L   + ++++SE
Sbjct: 2736 KLFDHINDIKFSE 2748


>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
            B0365.7 protein.
          Length = 2769

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 16/73 (21%), Positives = 38/73 (52%)
 Frame = +2

Query: 26   TKMSRELRKISGISKTIQLFGRRHSNKSKADKQVRIYQPTYQLNPRKRFNVEKVEKMLNT 205
            T  ++E+ +I    + I+  GR   +   + K +++    Y  +P  R +++ +  +LNT
Sbjct: 2678 TARNKEIAEIETSLRAIE--GRMSESIDYSMKIIKMCYSLYLFDPFYRISLKSLVNVLNT 2735

Query: 206  ILDSELAEVEYSE 244
             L   + ++++SE
Sbjct: 2736 KLFDHINDIKFSE 2748


>Z70783-11|CAA94860.2|  782|Caenorhabditis elegans Hypothetical
           protein ZK856.12 protein.
          Length = 782

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = +2

Query: 131 IYQPTYQLNPRKRFNVEKVEKMLNTILDSELAEVEYSEKLIPELCMNLADSIRISVKEEN 310
           I   T+    +K   VE         +  + A++  SE L  +L +NLADS+R +  E+N
Sbjct: 684 ICSETFVETDQKLMEVETGADAFTESITDQFAQM--SEGL-KKLAINLADSVRTAAIEKN 740

Query: 311 YDRY 322
           +D +
Sbjct: 741 HDAF 744


>U39995-3|AAF99995.2|  572|Caenorhabditis elegans Hypothetical
           protein M60.2 protein.
          Length = 572

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -3

Query: 309 FSSFTEIRILSARFIHSSGINFSLYSTSANSESKIVLSI-FSTFSTLKRFLG 157
           F++FT   + ++ F +   IN+   S   N ++K++  + F T++  K  LG
Sbjct: 398 FNTFTATPMFASAFAYLQSINYKETSNLTNFKTKVLWPLWFGTYTRCKGPLG 449


>AF067608-12|AAC17651.1|  458|Caenorhabditis elegans Hypothetical
           protein B0511.2 protein.
          Length = 458

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +2

Query: 212 DSELAEVEYSEKLIPELCMNLADSIRISVKEENYDRYRIIVSVSIGQRRQQSVHVFHSFL 391
           DSEL  +E   +   EL +     +  ++ E N  +YR I + S     +   HVFH+F 
Sbjct: 257 DSELKSLEPQSRCNFELKIKFFQKLWYNISE-NPLKYRKIYADSELVTFETQSHVFHNFF 315

Query: 392 WD 397
           +D
Sbjct: 316 FD 317


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,716,911
Number of Sequences: 27780
Number of extensions: 219666
Number of successful extensions: 744
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)