BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16i19
(712 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 3.8
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 22 5.0
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 8.7
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 8.7
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.6 bits (46), Expect = 3.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 705 TLHRDESILNVLKIKLQFSMIPGFLV 628
T D S N + I +QFS++ GF++
Sbjct: 686 TRSADLSSYNCVPINVQFSVLYGFVI 711
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 22.2 bits (45), Expect = 5.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 229 DVQQRYERPKDIEHKNILKSRPRLVMTPA 315
DV + + D EH N S PR+++T A
Sbjct: 266 DVLRSWRNLMD-EHSNRTNSDPRMILTEA 293
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 4 IESLLFDYKTSSLRDYNNGQILPITATKYIDKEVCLRIP-PAPL 132
I SL +YK S+ +YNN +Y + +IP P P+
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPI 125
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 4 IESLLFDYKTSSLRDYNNGQILPITATKYIDKEVCLRIP-PAPL 132
I SL +YK S+ +YNN +Y + +IP P P+
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPI 125
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 4 IESLLFDYKTSSLRDYNNGQILPITATKYIDKEVCLRIP-PAPL 132
I SL +YK S+ +YNN +Y + +IP P P+
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPI 125
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 4 IESLLFDYKTSSLRDYNNGQILPITATKYIDKEVCLRIP-PAPL 132
I SL +YK S+ +YNN +Y + +IP P P+
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPI 125
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 4 IESLLFDYKTSSLRDYNNGQILPITATKYIDKEVCLRIP-PAPL 132
I SL +YK S+ +YNN +Y + +IP P P+
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPI 125
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 4 IESLLFDYKTSSLRDYNNGQILPITATKYIDKEVCLRIP-PAPL 132
I SL +YK S+ +YNN +Y + +IP P P+
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPI 125
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 4 IESLLFDYKTSSLRDYNNGQILPITATKYIDKEVCLRIP-PAPL 132
I SL +YK S+ +YNN +Y + +IP P P+
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPI 125
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.4 bits (43), Expect = 8.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 199 ASQIDPLRPSRLVSNDSEC 143
A I +RP RL S D EC
Sbjct: 813 ALMIVGIRPERLPSFDDEC 831
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.4 bits (43), Expect = 8.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 199 ASQIDPLRPSRLVSNDSEC 143
A I +RP RL S D EC
Sbjct: 851 ALMIVGIRPERLPSFDDEC 869
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,230
Number of Sequences: 438
Number of extensions: 4423
Number of successful extensions: 25
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -