Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16i18
         (675 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    25   0.66 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    25   0.66 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    25   0.87 
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    22   6.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.1  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -3

Query: 586 GNGVNDISPVRIKLIYFVIFAFQILWIN 503
           G+G+ DI  ++ KL +F+     + W++
Sbjct: 45  GDGIGDIEGIKEKLDHFLEMGVDMFWLS 72


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -3

Query: 586 GNGVNDISPVRIKLIYFVIFAFQILWIN 503
           G+G+ DI  ++ KL +F+     + W++
Sbjct: 45  GDGIGDIEGIKEKLDHFLEMGVDMFWLS 72


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 16/65 (24%), Positives = 27/65 (41%)
 Frame = +2

Query: 245 LLQMIPETITVTEEDTMPVEEYTQPSLSYMSSSMFATILEDTIIQIRILDECNSELRIIK 424
           LL ++PE + V     +     TQ    YMS     +IL   I+    +    S   ++K
Sbjct: 237 LLSVLPEHVAVKMRQDLGASLDTQFKKIYMSRHENVSILYADIVGFTAISSTYSASELVK 296

Query: 425 TLADI 439
            L ++
Sbjct: 297 ILNEL 301


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 173 LWRGPIVRLLDF*HASPSFYITTKEYCL*NNIS 75
           L +GP+   ++     PS Y+T  +  L NNIS
Sbjct: 27  LKKGPLDSNVEVVVGVPSIYLTYAKNILPNNIS 59


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 342 LCLRLYWKTLLFKFEYL 392
           LC++L WK+   +F+ L
Sbjct: 215 LCMKLGWKSARTRFDIL 231


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,301
Number of Sequences: 438
Number of extensions: 3828
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)