Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16i16
         (703 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97405-6|AAB53013.2|  142|Caenorhabditis elegans Hypothetical pr...    42   4e-04
Z77653-1|CAB01124.1|  218|Caenorhabditis elegans Hypothetical pr...    41   0.001
X04259-1|CAA27814.1|  161|Caenorhabditis elegans cal-1 protein.        41   0.001
AJ132193-1|CAA10601.1|  149|Caenorhabditis elegans calmodulin pr...    40   0.002
AF016429-2|AAB65364.1|  149|Caenorhabditis elegans Calmodulin pr...    40   0.002
Z82282-1|CAB05271.1|  182|Caenorhabditis elegans Hypothetical pr...    38   0.005
Z70034-1|CAA93852.2|  171|Caenorhabditis elegans Hypothetical pr...    36   0.021
AJ512489-1|CAD54672.1|  171|Caenorhabditis elegans calmodulin-li...    36   0.021
L39927-1|AAA98784.1|  344|Caenorhabditis elegans cathepsin B-lik...    29   3.2  
L39896-1|AAA98786.1|  344|Caenorhabditis elegans cathepsin B-lik...    29   3.2  
AF016426-3|AAB65346.1|  344|Caenorhabditis elegans Cysteine prot...    29   3.2  
Z92973-1|CAB07493.2|  323|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z81455-3|CAB03808.2|  890|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z81053-2|CAB02878.2|  202|Caenorhabditis elegans Hypothetical pr...    28   5.6  
AL032623-19|CAA21519.2|  890|Caenorhabditis elegans Hypothetical...    28   5.6  
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.      28   7.4  
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein...    28   7.4  
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein...    28   7.4  

>U97405-6|AAB53013.2|  142|Caenorhabditis elegans Hypothetical
           protein T09B4.4 protein.
          Length = 142

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = +3

Query: 519 EFRECFYLFARSGQITSLDELTVIMRSLGMSPTIQELAGYLKGKGGK-MSFADFLEV 686
           E RECF  ++ SG + +  +L   +RSLG SPT  +   Y K    K + FA FL++
Sbjct: 12  EIRECFNFYSTSGVLRTDSQLRCALRSLGYSPTASKTDIYFKKLNKKPIEFATFLDI 68


>Z77653-1|CAB01124.1|  218|Caenorhabditis elegans Hypothetical
           protein C13C12.1 protein.
          Length = 218

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
 Frame = +3

Query: 504 PSRT*EFRECFYLFARSGQIT-SLDELTVIMRSLGMSPTIQELAGYLK----GKGGKMSF 668
           P    EFRE F +F + G  T S  EL + MRSLG +PT QE+   +        G++ F
Sbjct: 77  PEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIEF 136

Query: 669 ADFLEVM 689
            +F  +M
Sbjct: 137 PEFCVMM 143


>X04259-1|CAA27814.1|  161|Caenorhabditis elegans cal-1 protein.
          Length = 161

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
 Frame = +3

Query: 504 PSRT*EFRECFYLFARSGQIT-SLDELTVIMRSLGMSPTIQELAGYLK----GKGGKMSF 668
           P    EFRE F +F + G  T S  EL + MRSLG +PT QE+   +        G++ F
Sbjct: 20  PEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIEF 79

Query: 669 ADFLEVM 689
            +F  +M
Sbjct: 80  PEFCVMM 86


>AJ132193-1|CAA10601.1|  149|Caenorhabditis elegans calmodulin
           protein.
          Length = 149

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
 Frame = +3

Query: 519 EFRECFYLFARSGQIT-SLDELTVIMRSLGMSPT---IQELAGYLKGKG-GKMSFADFLE 683
           EF+E F LF + G  T +  EL  +MRSLG +PT   +Q++   +   G G + F +FL 
Sbjct: 12  EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71

Query: 684 VM 689
           +M
Sbjct: 72  MM 73


>AF016429-2|AAB65364.1|  149|Caenorhabditis elegans Calmodulin
           protein 1 protein.
          Length = 149

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
 Frame = +3

Query: 519 EFRECFYLFARSGQIT-SLDELTVIMRSLGMSPT---IQELAGYLKGKG-GKMSFADFLE 683
           EF+E F LF + G  T +  EL  +MRSLG +PT   +Q++   +   G G + F +FL 
Sbjct: 12  EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71

Query: 684 VM 689
           +M
Sbjct: 72  MM 73


>Z82282-1|CAB05271.1|  182|Caenorhabditis elegans Hypothetical
           protein T07G12.1 protein.
          Length = 182

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
 Frame = +3

Query: 504 PSRT*EFRECFYLFARSGQIT-SLDELTVIMRSLGMSPTIQELAG----YLKGKGGKMSF 668
           P    EF + F LF + G  T ++ EL   MR LG++PT +EL      Y     GK+ F
Sbjct: 19  PEELQEFAQAFKLFDKDGNNTMNIKELGEAMRMLGLNPTEEELLNMVNEYDVDGNGKIDF 78

Query: 669 ADFLEVM 689
            +F ++M
Sbjct: 79  GEFCKMM 85


>Z70034-1|CAA93852.2|  171|Caenorhabditis elegans Hypothetical
           protein C18E9.1 protein.
          Length = 171

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
 Frame = +3

Query: 492 DCQNPSRT*EFRECFYLFARSGQIT-SLDELTVIMRSLGMSPTIQELAGYLK----GKGG 656
           D  N     E++  F LF + G  + S  EL V MRSLG +PT QEL   +        G
Sbjct: 27  DGLNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQELLDMVNEVDIDGSG 86

Query: 657 KMSFADFLEVM 689
            + F +F ++M
Sbjct: 87  TIDFGEFCQMM 97


>AJ512489-1|CAD54672.1|  171|Caenorhabditis elegans calmodulin-like
           protein protein.
          Length = 171

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
 Frame = +3

Query: 492 DCQNPSRT*EFRECFYLFARSGQIT-SLDELTVIMRSLGMSPTIQELAGYLK----GKGG 656
           D  N     E++  F LF + G  + S  EL V MRSLG +PT QEL   +        G
Sbjct: 27  DGLNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQELLDMVNEVDIDGSG 86

Query: 657 KMSFADFLEVM 689
            + F +F ++M
Sbjct: 87  TIDFGEFCQMM 97


>L39927-1|AAA98784.1|  344|Caenorhabditis elegans cathepsin B-like
           cysteine proteinaseprotein.
          Length = 344

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 654 PLCPSDNQPTPGLWDSC 604
           P CP D +PTP   DSC
Sbjct: 201 PACPEDTEPTPKCVDSC 217


>L39896-1|AAA98786.1|  344|Caenorhabditis elegans cathepsin B-like
           cysteine proteinaseprotein.
          Length = 344

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 654 PLCPSDNQPTPGLWDSC 604
           P CP D +PTP   DSC
Sbjct: 201 PACPEDTEPTPKCVDSC 217


>AF016426-3|AAB65346.1|  344|Caenorhabditis elegans Cysteine
           protease related protein 5 protein.
          Length = 344

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 654 PLCPSDNQPTPGLWDSC 604
           P CP D +PTP   DSC
Sbjct: 201 PACPEDTEPTPKCVDSC 217


>Z92973-1|CAB07493.2|  323|Caenorhabditis elegans Hypothetical
           protein Y6G8.1 protein.
          Length = 323

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 11/43 (25%), Positives = 26/43 (60%)
 Frame = -1

Query: 367 IHYLFLLTNMTITLLFRVEHVIKSNMQSSVICPTYKFLVFVIN 239
           IH++ L   +T+ L+ +V ++  +   S+++C + +F  F+ N
Sbjct: 257 IHFILLSDFVTMPLIIQVSYLACNKRNSNMLCSSLRFRQFMRN 299


>Z81455-3|CAB03808.2|  890|Caenorhabditis elegans Hypothetical
           protein B0399.2 protein.
          Length = 890

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 14/57 (24%), Positives = 29/57 (50%)
 Frame = -1

Query: 394 SSLSSFINEIHYLFLLTNMTITLLFRVEHVIKSNMQSSVICPTYKFLVFVINFMLYD 224
           SS+  ++ +I Y+  L +  +  +F+     +S +QS  +C     L+ V+   LY+
Sbjct: 281 SSILCYLGDISYVMYLVHWPVIAIFK-----ESTIQSHAVCIALTLLISVVAHHLYE 332


>Z81053-2|CAB02878.2|  202|Caenorhabditis elegans Hypothetical
           protein E02A10.3 protein.
          Length = 202

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = +3

Query: 519 EFRECFYLFA--RSGQITSLDELTVIMRSLGMSPTIQEL 629
           E+R+ F +F   RSG I ++DEL   +++LG+  T  EL
Sbjct: 57  EYRQVFNMFDADRSGAI-AIDELEAAIKNLGLEQTRDEL 94


>AL032623-19|CAA21519.2|  890|Caenorhabditis elegans Hypothetical
           protein B0399.2 protein.
          Length = 890

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 14/57 (24%), Positives = 29/57 (50%)
 Frame = -1

Query: 394 SSLSSFINEIHYLFLLTNMTITLLFRVEHVIKSNMQSSVICPTYKFLVFVINFMLYD 224
           SS+  ++ +I Y+  L +  +  +F+     +S +QS  +C     L+ V+   LY+
Sbjct: 281 SSILCYLGDISYVMYLVHWPVIAIFK-----ESTIQSHAVCIALTLLISVVAHHLYE 332


>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical
           protein ZK662.4 protein.
          Length = 1440

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 564 TSLDELTVIMRSLGMSPTIQELAGYLKGKGGK 659
           T ++ L VI R    SP +   AGY  G GGK
Sbjct: 491 TDMEFLAVIAREYLASPAVSIDAGYYFGNGGK 522


>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical
           protein ZK662.4 protein.
          Length = 1440

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 564 TSLDELTVIMRSLGMSPTIQELAGYLKGKGGK 659
           T ++ L VI R    SP +   AGY  G GGK
Sbjct: 491 TDMEFLAVIAREYLASPAVSIDAGYYFGNGGK 522


>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
          Length = 1440

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 564 TSLDELTVIMRSLGMSPTIQELAGYLKGKGGK 659
           T ++ L VI R    SP +   AGY  G GGK
Sbjct: 491 TDMEFLAVIAREYLASPAVSIDAGYYFGNGGK 522


>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
           protein.
          Length = 1440

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 564 TSLDELTVIMRSLGMSPTIQELAGYLKGKGGK 659
           T ++ L VI R    SP +   AGY  G GGK
Sbjct: 491 TDMEFLAVIAREYLASPAVSIDAGYYFGNGGK 522


>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
           protein.
          Length = 1440

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 564 TSLDELTVIMRSLGMSPTIQELAGYLKGKGGK 659
           T ++ L VI R    SP +   AGY  G GGK
Sbjct: 491 TDMEFLAVIAREYLASPAVSIDAGYYFGNGGK 522


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,603,359
Number of Sequences: 27780
Number of extensions: 355517
Number of successful extensions: 730
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)