Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16i15
         (729 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    25   0.73 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   1.7  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   9.0  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   9.0  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +3

Query: 270 CCWHCF 287
           CCWHCF
Sbjct: 605 CCWHCF 610


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 484 TALGFLLFRTPEQCPSVVSLLAESYNPH 567
           +ALG     +P   PS    L  SY+PH
Sbjct: 292 SALGRSACHSPGVYPSTAGFLPPSYHPH 319


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = +2

Query: 542 CWLNRTILMFVTXXXXXXXXXXXXXGIVMPLDSWNQWLNS 661
           CWL   IL   T              I+MP  +W  W+NS
Sbjct: 318 CWLPFFILYLATPFVPVEPPD-----ILMPALTWLGWINS 352


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 342 RQRSIIATCWLLHYSNC 392
           R R ++AT W+L +  C
Sbjct: 181 RARLLVATVWILSFVIC 197


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,869
Number of Sequences: 438
Number of extensions: 3903
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)