Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16i13
         (602 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111745-1|AAI11746.1|  653|Homo sapiens leucine rich repeat con...    30   5.4  
BC111561-1|AAI11562.1|  653|Homo sapiens leucine rich repeat con...    30   5.4  
AY358307-1|AAQ88674.1|  653|Homo sapiens NAG14 protein.                30   5.4  
AK172751-1|BAD18737.1|  653|Homo sapiens protein ( Homo sapiens ...    30   5.4  
AJ297858-1|CAC82651.1|  649|Homo sapiens hypothetical protein pr...    30   5.4  
AF196976-1|AAG28019.2|  653|Homo sapiens brain tumor associated ...    30   5.4  
DQ516347-1|ABF55377.1|  578|Homo sapiens dystrotelin protein.          30   7.2  
DQ065694-1|ABA00104.1|  121|Homo sapiens immunoglobulin epsilon ...    29   9.5  
DQ065668-1|ABA00078.1|  121|Homo sapiens immunoglobulin epsilon ...    29   9.5  

>BC111745-1|AAI11746.1|  653|Homo sapiens leucine rich repeat
           containing 4 protein.
          Length = 653

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +2

Query: 446 FITITILRRTSSPQTSTARHRPPPGLATKIEPALLASSGSCGRPTHAKRNV 598
           F T+T+     SP+ +T +++P P  +T  +PA   S+    + T   + V
Sbjct: 454 FTTVTVETTEISPEDTTRKYKPVPTTSTGYQPAYTTSTTVLIQTTRVPKQV 504


>BC111561-1|AAI11562.1|  653|Homo sapiens leucine rich repeat
           containing 4 protein.
          Length = 653

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +2

Query: 446 FITITILRRTSSPQTSTARHRPPPGLATKIEPALLASSGSCGRPTHAKRNV 598
           F T+T+     SP+ +T +++P P  +T  +PA   S+    + T   + V
Sbjct: 454 FTTVTVETTEISPEDTTRKYKPVPTTSTGYQPAYTTSTTVLIQTTRVPKQV 504


>AY358307-1|AAQ88674.1|  653|Homo sapiens NAG14 protein.
          Length = 653

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +2

Query: 446 FITITILRRTSSPQTSTARHRPPPGLATKIEPALLASSGSCGRPTHAKRNV 598
           F T+T+     SP+ +T +++P P  +T  +PA   S+    + T   + V
Sbjct: 454 FTTVTVETTEISPEDTTRKYKPVPTTSTGYQPAYTTSTTVLIQTTRVPKQV 504


>AK172751-1|BAD18737.1|  653|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23912 fis, clone CAE04210, highly similar to
           Homo sapiens leucine rich repeat containing 4 (LRRC4).
           ).
          Length = 653

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +2

Query: 446 FITITILRRTSSPQTSTARHRPPPGLATKIEPALLASSGSCGRPTHAKRNV 598
           F T+T+     SP+ +T +++P P  +T  +PA   S+    + T   + V
Sbjct: 454 FTTVTVETTEISPEDTTRKYKPVPTTSTGYQPAYTTSTTVLIQTTRVPKQV 504


>AJ297858-1|CAC82651.1|  649|Homo sapiens hypothetical protein
           protein.
          Length = 649

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +2

Query: 446 FITITILRRTSSPQTSTARHRPPPGLATKIEPALLASSGSCGRPTHAKRNV 598
           F T+T+     SP+ +T +++P P  +T  +PA   S+    + T   + V
Sbjct: 450 FTTVTVETTEISPEDTTRKYKPVPTTSTGYQPAYTTSTTVLIQTTRVPKQV 500


>AF196976-1|AAG28019.2|  653|Homo sapiens brain tumor associated
           protein LRRC4 protein.
          Length = 653

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +2

Query: 446 FITITILRRTSSPQTSTARHRPPPGLATKIEPALLASSGSCGRPTHAKRNV 598
           F T+T+     SP+ +T +++P P  +T  +PA   S+    + T   + V
Sbjct: 454 FTTVTVETTEISPEDTTRKYKPVPTTSTGYQPAYTTSTTVLIQTTRVPKQV 504


>DQ516347-1|ABF55377.1|  578|Homo sapiens dystrotelin protein.
          Length = 578

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +3

Query: 423 LLSTIRNDLLQLQYLDEQAAHRRPLLDIGLPQASPRRSSLHYL 551
           L  T+RN+LLQ +   ++AA R+ LLD   P+  P  +    L
Sbjct: 287 LFRTLRNNLLQGRCRKKEAARRQQLLDQVNPKGVPHHAQARLL 329


>DQ065694-1|ABA00104.1|  121|Homo sapiens immunoglobulin epsilon
           heavy chain variable region protein.
          Length = 121

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 38  KSIRYSFTLIYFCLRFADFW 97
           KS+R   T +Y+C R+ DFW
Sbjct: 84  KSLRAEDTAMYYCARYYDFW 103


>DQ065668-1|ABA00078.1|  121|Homo sapiens immunoglobulin epsilon
           heavy chain variable region protein.
          Length = 121

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 38  KSIRYSFTLIYFCLRFADFW 97
           KS+R   T +Y+C R+ DFW
Sbjct: 84  KSLRAEDTAMYYCARYYDFW 103


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,963,450
Number of Sequences: 237096
Number of extensions: 2214830
Number of successful extensions: 9165
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9164
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)